RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 PIGSQ96S52 555 aa17.78■□□□□ 0.44
TSPAN9-203ENST00000431374 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
TSPAN9-203ENST00000431374 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
TSPAN9-203ENST00000431374 PHF24Q9UPV7 400 aa17.78■□□□□ 0.44
TSPAN9-203ENST00000431374 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 OPLAHO14841 1288 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 REC8O95072 547 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 HSPA4P34932 840 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 TNFAIP2Q03169 654 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 SPZ1Q9BXG8 430 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 PDGFCQ9NRA1 345 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
TSPAN9-203ENST00000431374 RANBP2P49792 3224 aaKnown RBP17.77■□□□□ 0.43
TSPAN9-203ENST00000431374 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 RXRAP19793 462 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 GNAQP50148 359 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 GJA9P57773 515 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 NKX3-2P78367 333 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 GHRHRQ02643 423 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 SNX17Q15036 470 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 CCSAPQ6IQ19 270 aaPredicted RBP17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 TCEANC2Q96MN5 208 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 LZTS2Q9BRK4 669 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 TSEN34Q9BSV6 310 aaKnown RBP17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 GNEQ9Y223 722 aaKnown RBP17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 FRMPD3Q5JV73 1810 aa17.76■□□□□ 0.43
TSPAN9-203ENST00000431374 PLEKHA8P1O95397 391 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 CALM1P0DP23 149 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 CALM2P0DP24 149 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 CALM3P0DP25 149 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 SMPD1P17405 629 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 SMARCA1P28370 1054 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 RTP1P59025 263 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 PDE4DQ08499 809 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 TRAF1Q13077 416 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 IQSEC1Q6DN90 963 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 CHRDL2Q6WN34 429 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 SLC39A5Q6ZMH5 540 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 MPHOSPH6Q99547 160 aaKnown RBP17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 SPC25Q9HBM1 224 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 COLQQ9Y215 455 aaPredicted RBP17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 SNX14Q9Y5W7 946 aa17.75■□□□□ 0.43
TSPAN9-203ENST00000431374 A0A1W2PQ45 241 aaPredicted RBP17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 A0A1W2PQY0 241 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 MOXD2PA6NHM9 499 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 CTAGE5O15320 804 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 C6orf222P0C671 652 aaPredicted RBP17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 PTGS1P23219 599 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 HSD17B4P51659 736 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 ACLYP53396 1101 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 KCNA10Q16322 511 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 TLK2Q86UE8 772 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 RAB11FIP4Q86YS3 637 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 TAAR1Q96RJ0 339 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 SMCHD1A6NHR9 2005 aa17.74■□□□□ 0.43
TSPAN9-203ENST00000431374 B4DLN1 442 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 CFBP00751 764 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 C1orf53Q5VUE5 145 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 NSUN6Q8TEA1 469 aaKnown RBP17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 PIBF1Q8WXW3 757 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 RRP36Q96EU6 259 aaKnown RBP17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 RMDN3Q96TC7 470 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
TSPAN9-203ENST00000431374 LCTP09848 1927 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 SYN1P17600 705 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 DUSP28Q4G0W2 176 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 GNASQ5JWF2 1037 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 APOA5Q6Q788 366 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 SAMD3Q8N6K7 520 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 PCSK9Q8NBP7 692 aaKnown RBP17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 MAP3K20Q9NYL2 800 aaKnown RBP17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 Q9Y3F1 56 aa17.72■□□□□ 0.43
TSPAN9-203ENST00000431374 DNAH12Q6ZR08 3092 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms