RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 TNKSO95271 1327 aa26.21■■□□□ 1.79
PTPRA-207ENST00000431048 RFC2P35250 354 aa26.21■■□□□ 1.79
PTPRA-207ENST00000431048 LRRFIP1Q32MZ4 808 aaKnown RBP26.21■■□□□ 1.79
PTPRA-207ENST00000431048 GPATCH3Q96I76 525 aa26.21■■□□□ 1.79
PTPRA-207ENST00000431048 TRMT13Q9NUP7 481 aaKnown RBP26.21■■□□□ 1.79
PTPRA-207ENST00000431048 TCF20Q9UGU0 1960 aaKnown RBP26.2■■□□□ 1.79
PTPRA-207ENST00000431048 RBM47A0AV96 593 aaKnown RBP26.2■■□□□ 1.78
PTPRA-207ENST00000431048 CA3P07451 260 aa26.2■■□□□ 1.78
PTPRA-207ENST00000431048 CYP2C9P11712 490 aa26.2■■□□□ 1.78
PTPRA-207ENST00000431048 ACTN1P12814 892 aa26.2■■□□□ 1.78
PTPRA-207ENST00000431048 PURAQ00577 322 aaKnown RBP26.2■■□□□ 1.78
PTPRA-207ENST00000431048 SLC9A7Q96T83 725 aa26.2■■□□□ 1.78
PTPRA-207ENST00000431048 ADD3Q9UEY8 706 aaKnown RBP26.2■■□□□ 1.78
PTPRA-207ENST00000431048 PRRC2BQ5JSZ5 2229 aaKnown RBP26.19■■□□□ 1.78
PTPRA-207ENST00000431048 CPT1AP50416 773 aa26.19■■□□□ 1.78
PTPRA-207ENST00000431048 KCNQ1P51787 676 aa26.19■■□□□ 1.78
PTPRA-207ENST00000431048 PPARAQ07869 468 aa26.19■■□□□ 1.78
PTPRA-207ENST00000431048 SKIV2LQ15477 1246 aaKnown RBP26.19■■□□□ 1.78
PTPRA-207ENST00000431048 KCTD1Q719H9 257 aa26.19■■□□□ 1.78
PTPRA-207ENST00000431048 WDR11Q9BZH6 1224 aa26.19■■□□□ 1.78
PTPRA-207ENST00000431048 RFXAPO00287 272 aa26.18■■□□□ 1.78
PTPRA-207ENST00000431048 ICAM1P05362 532 aa26.18■■□□□ 1.78
PTPRA-207ENST00000431048 NSMFQ6X4W1 530 aa26.18■■□□□ 1.78
PTPRA-207ENST00000431048 MTG1Q9BT17 334 aaPredicted RBP26.18■■□□□ 1.78
PTPRA-207ENST00000431048 CCPG1Q9ULG6 757 aa26.18■■□□□ 1.78
PTPRA-207ENST00000431048 PITPNM1O00562 1244 aa26.17■■□□□ 1.78
PTPRA-207ENST00000431048 HOXD11P31277 338 aaPredicted RBP26.17■■□□□ 1.78
PTPRA-207ENST00000431048 NOVP48745 357 aa26.17■■□□□ 1.78
PTPRA-207ENST00000431048 SNAP25P60880 206 aa26.17■■□□□ 1.78
PTPRA-207ENST00000431048 DEFB128Q7Z7B8 93 aa26.17■■□□□ 1.78
PTPRA-207ENST00000431048 PURBQ96QR8 312 aaKnown RBP26.17■■□□□ 1.78
PTPRA-207ENST00000431048 NAPBQ9H115 298 aa26.17■■□□□ 1.78
PTPRA-207ENST00000431048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.17■■□□□ 1.78
PTPRA-207ENST00000431048 TLL1O43897 1013 aa26.16■■□□□ 1.78
PTPRA-207ENST00000431048 ALDH5A1P51649 535 aaPredicted RBP26.16■■□□□ 1.78
PTPRA-207ENST00000431048 BAATQ14032 418 aaPredicted RBP26.16■■□□□ 1.78
PTPRA-207ENST00000431048 NFRKBQ6P4R8 1299 aa26.16■■□□□ 1.78
PTPRA-207ENST00000431048 RANBP17Q9H2T7 1088 aaKnown RBP26.16■■□□□ 1.78
PTPRA-207ENST00000431048 GPHNQ9NQX3 736 aaPredicted RBP26.16■■□□□ 1.78
PTPRA-207ENST00000431048 IL17RBQ9NRM6 502 aa26.16■■□□□ 1.78
PTPRA-207ENST00000431048 STX8Q9UNK0 236 aa26.16■■□□□ 1.78
PTPRA-207ENST00000431048 EPOPA6NHQ4 379 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 KPNA6O60684 536 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 MYL3P08590 195 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 IQCF3P0C7M6 154 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 TAP1Q03518 808 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 PTPN11Q06124 597 aaPredicted RBP26.15■■□□□ 1.78
PTPRA-207ENST00000431048 BRDTQ58F21 947 aaPredicted RBP26.15■■□□□ 1.78
PTPRA-207ENST00000431048 BTNL9Q6UXG8 535 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 DCTPP1Q9H773 170 aa26.15■■□□□ 1.78
PTPRA-207ENST00000431048 KIF28PB7ZC32 967 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 NKRFO15226 690 aaKnown RBP eCLIP26.14■■□□□ 1.78
PTPRA-207ENST00000431048 NBPF20Q3BBV1 942 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 HERC6Q8IVU3 1022 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 RETREG2Q8NC44 543 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 DCAF4Q8WV16 495 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 CHMP4CQ96CF2 233 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 SEC62Q99442 399 aaKnown RBP26.14■■□□□ 1.78
PTPRA-207ENST00000431048 LRFN3Q9BTN0 628 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 CERS4Q9HA82 394 aa26.14■■□□□ 1.78
PTPRA-207ENST00000431048 TSPY2A6NKD2 308 aa26.13■■□□□ 1.77
PTPRA-207ENST00000431048 TSHZ3Q63HK5 1081 aa26.13■■□□□ 1.77
PTPRA-207ENST00000431048 OR6J1Q8NGC5 347 aa26.13■■□□□ 1.77
PTPRA-207ENST00000431048 HLA-CQ95604 372 aa26.13■■□□□ 1.77
PTPRA-207ENST00000431048 EPHX3Q9H6B9 360 aa26.13■■□□□ 1.77
PTPRA-207ENST00000431048 LCTP09848 1927 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 A6NJR5 290 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 BAIAP3O94812 1187 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 ZMYM1Q5SVZ6 1142 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 ARNTL2Q8WYA1 636 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 SCN10AQ9Y5Y9 1956 aa26.12■■□□□ 1.77
PTPRA-207ENST00000431048 BFSP2Q13515 415 aa26.11■■□□□ 1.77
PTPRA-207ENST00000431048 PNMA2Q9UL42 364 aa26.11■■□□□ 1.77
PTPRA-207ENST00000431048 RAD50Q92878 1312 aa26.11■■□□□ 1.77
PTPRA-207ENST00000431048 NFIBO00712 420 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 NMT2O60551 498 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 ARHGEF15O94989 841 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 FAM47CQ5HY64 1035 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 KRT40Q6A162 431 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 FTOQ9C0B1 505 aaKnown RBP eCLIP26.1■■□□□ 1.77
PTPRA-207ENST00000431048 LMCD1Q9NZU5 365 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 ANAPC4Q9UJX5 808 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 SCN5AQ14524 2016 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 TTC41PQ6P2S7 1318 aa26.1■■□□□ 1.77
PTPRA-207ENST00000431048 EDNRBP24530 442 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 GRB10Q13322 594 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 TMEM31Q5JXX7 168 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 SYDE2Q5VT97 1194 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 RASGRP2Q7LDG7 609 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 SCFD2Q8WU76 684 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 MPHOSPH6Q99547 160 aaKnown RBP26.09■■□□□ 1.77
PTPRA-207ENST00000431048 HCN4Q9Y3Q4 1203 aa26.09■■□□□ 1.77
PTPRA-207ENST00000431048 PTPDC1A2A3K4 754 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 LPXNO60711 386 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 FGRP09769 529 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 PPP2R5BQ15173 497 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 CCDC96Q2M329 555 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 TTBK2Q6IQ55 1244 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 CLEC4DQ8WXI8 215 aa26.08■■□□□ 1.77
PTPRA-207ENST00000431048 INCENPQ9NQS7 918 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms