RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 NFIBO00712 420 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 DYNC1LI2O43237 492 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 FPGSQ05932 587 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 USH1GQ495M9 461 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 DUSP28Q4G0W2 176 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 CCSAPQ6IQ19 270 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 CATIPQ7Z7H3 387 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 FBXO11Q86XK2 927 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 ADGRF4Q8IZF3 695 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 SAMD3Q8N6K7 520 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 NSUN6Q8TEA1 469 aaKnown RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 SCFD2Q8WU76 684 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 BADQ92934 168 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 LENG1Q96BZ8 264 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-211ENST00000430454 IWS1Q96ST2 819 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 AMNQ9BXJ7 453 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 WDR11Q9BZH6 1224 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 UBA5Q9GZZ9 404 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 KATNBL1Q9H079 304 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
HDAC9-211ENST00000430454 KLRF2D3W0D1 207 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 SGSM2O43147 1006 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 SMPD1P17405 629 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 TTLL4Q14679 1199 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 WTAPQ15007 396 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 PPP2R5BQ15173 497 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-211ENST00000430454 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 RASGRP2Q7LDG7 609 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 FBXO16Q8IX29 292 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-211ENST00000430454 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 TMEM199Q8N511 208 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 VAT1LQ9HCJ6 419 aa10.62□□□□□ -0.71
HDAC9-211ENST00000430454 GNEQ9Y223 722 aaKnown RBP10.62□□□□□ -0.71
HDAC9-211ENST00000430454 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
HDAC9-211ENST00000430454 TIMP1P01033 207 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 CYP21A2P08686 494 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 SUPT20HL2P0C7V6 817 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 KIF5BP33176 963 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 CDK7P50613 346 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 PPIGQ13427 754 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC9-211ENST00000430454 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 FAM109BQ6ICB4 259 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-211ENST00000430454 TAPT1Q6NXT6 567 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 DEFB123Q8N688 67 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 MAP4K1Q92918 833 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 LZTS2Q9BRK4 669 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 MTA3Q9BTC8 594 aa10.61□□□□□ -0.71
HDAC9-211ENST00000430454 MTIF3Q9H2K0 278 aaKnown RBP10.61□□□□□ -0.71
HDAC9-211ENST00000430454 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 MYADML2A6NDP7 307 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 E7EWF7 191 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 ZBTB5O15062 677 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 MCM5P33992 734 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 GNAQP50148 359 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 BEX3Q00994 111 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 ITGA7Q13683 1181 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 SEC23AQ15436 765 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 STXBP2Q15833 593 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 QRICH1Q2TAL8 776 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 MFSD5Q6N075 450 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 KCNV1Q6PIU1 500 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 CXCL17Q6UXB2 119 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 RNPC3Q96LT9 517 aaKnown RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 RMDN3Q96TC7 470 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 MTG1Q9BT17 334 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-211ENST00000430454 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 PDGFCQ9NRA1 345 aa10.6□□□□□ -0.71
HDAC9-211ENST00000430454 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 ADCY6O43306 1168 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 CALM1P0DP23 149 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 CALM2P0DP24 149 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 CALM3P0DP25 149 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 TXNP10599 105 aaKnown RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 EDNRBP24530 442 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 SMAD3P84022 425 aaKnown RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 PTH1RQ03431 593 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 GRM4Q14833 912 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 SHHQ15465 462 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 BMP2KLQ5H9B9 411 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 PSRC1Q6PGN9 363 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 SYNE3Q6ZMZ3 975 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 NFXL1Q6ZNB6 911 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms