RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 MOXD2PA6NHM9 499 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 hCG_1984214I3L0E3 225 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 SH2B2O14492 632 aaPredicted RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 NKRFO15226 690 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 ALAS1P13196 640 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 EXOSC10Q01780 885 aaKnown RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 ACVR2BQ13705 512 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 TMEM67Q5HYA8 995 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 DHX32Q7L7V1 743 aaKnown RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 RNF180Q86T96 592 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 ADGRF4Q8IZF3 695 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 ZNF713Q8N859 430 aaPredicted RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 TRPV1Q8NER1 839 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 NEK1Q96PY6 1258 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 JMJD4Q9H9V9 463 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 LY9Q9HBG7 655 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
SMC1A-203ENST00000428014 NID2Q14112 1375 aa10.63□□□□□ -0.71
SMC1A-203ENST00000428014 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PNMA6FA0A0J9YX94 578 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PRC1O43663 620 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PGK2P07205 417 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PSMA5P28066 241 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 HSD17B4P51659 736 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 EVCP57679 992 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 GJA9P57773 515 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 FBXO11Q86XK2 927 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PCSK9Q8NBP7 692 aaKnown RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 KLHDC9Q8NEP7 349 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 CTCFLQ8NI51 663 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PAWRQ96IZ0 340 aaKnown RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 TOX2Q96NM4 488 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 SPC25Q9HBM1 224 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 RBM28Q9NW13 759 aaKnown RBP10.62□□□□□ -0.71
SMC1A-203ENST00000428014 PHF24Q9UPV7 400 aa10.62□□□□□ -0.71
SMC1A-203ENST00000428014 ELP1O95163 1332 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 FRMPD2Q68DX3 1309 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 PIK3CDO00329 1044 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 ADAMTS4O75173 837 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 STAM2O75886 525 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 CABYRO75952 493 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 SLC16A2P36021 539 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 ANAPC15P60006 121 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 QRICH1Q2TAL8 776 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 MUM1L1Q5H9M0 696 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 CCSAPQ6IQ19 270 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 XRRA1Q6P2D8 792 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 CCDC144CPQ8IYA2 1237 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
SMC1A-203ENST00000428014 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
SMC1A-203ENST00000428014 MYH6P13533 1939 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 CCDC196A0A1B0GTZ2 297 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 SOWAHBA6NEL2 793 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 CCDC69A6NI79 296 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 NFIBO00712 420 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 BMP8BP34820 402 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 LRRC41Q15345 812 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 KCNV1Q6PIU1 500 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 NSUN6Q8TEA1 469 aaKnown RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 GLT8D2Q9H1C3 349 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 XPNPEP3Q9NQH7 507 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 ISY1Q9ULR0 285 aaKnown RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 GNEQ9Y223 722 aaKnown RBP10.6□□□□□ -0.71
SMC1A-203ENST00000428014 SLC12A7Q9Y666 1083 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 TAF6LQ9Y6J9 622 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 LRRC37A2A6NM11 1700 aa10.6□□□□□ -0.71
SMC1A-203ENST00000428014 ASTN1O14525 1302 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 MROH7Q68CQ1 1323 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 LCTP09848 1927 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 CYTH3O43739 400 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 EVI5O60447 810 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 KPNA6O60684 536 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 TGFB3P10600 412 aa10.59□□□□□ -0.71
SMC1A-203ENST00000428014 CNGA1P29973 690 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms