RNA–Protein interactions for RNA: ENST00000425483.1

LINC00454-201, long intergenic non-protein coding RNA 454, humanhuman

TSL 3 BASIC

Gene LINC00454, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-201ENST00000425483 CLTBP09497 229 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 SMPD1P17405 629 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
LINC00454-201ENST00000425483 NKX3-2P78367 333 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
LINC00454-201ENST00000425483 PDE4DQ08499 809 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 WTAPQ15007 396 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 MCF2L2Q86YR7 1114 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
LINC00454-201ENST00000425483 STAG2Q8N3U4 1231 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
LINC00454-201ENST00000425483 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 PDGFCQ9NRA1 345 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
LINC00454-201ENST00000425483 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
LINC00454-201ENST00000425483 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.27
LINC00454-201ENST00000425483 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.28
LINC00454-201ENST00000425483 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
LINC00454-201ENST00000425483 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 CTAGE5O15320 804 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
LINC00454-201ENST00000425483 ZEB2O60315 1214 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 EDNRBP24530 442 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 BEX3Q00994 111 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 GRM4Q14833 912 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
LINC00454-201ENST00000425483 TMEM67Q5HYA8 995 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 CHST3Q7LGC8 479 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 Q9Y3F1 56 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
LINC00454-201ENST00000425483 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 SOX1O00570 391 aaPredicted RBP13.32□□□□□ -0.28
LINC00454-201ENST00000425483 ZBTB5O15062 677 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 CABYRO75952 493 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 ANTXR2P58335 489 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 TROAPQ12815 778 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 DUSP28Q4G0W2 176 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
LINC00454-201ENST00000425483 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
LINC00454-201ENST00000425483 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 TMEM39AQ9NV64 488 aa13.32□□□□□ -0.28
LINC00454-201ENST00000425483 SMCHD1A6NHR9 2005 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
LINC00454-201ENST00000425483 ARVCFO00192 962 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 SLC27A2O14975 620 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 KIAA0355O15063 1070 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 RAG1P15918 1043 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 TRAF1Q13077 416 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 IGDCC4Q8TDY8 1250 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
LINC00454-201ENST00000425483 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 BADQ92934 168 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 MTMR8Q96EF0 704 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
LINC00454-201ENST00000425483 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00454-201ENST00000425483 PRC1O43663 620 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 PTGS1P23219 599 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 MCM5P33992 734 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 CDK7P50613 346 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 TMEM63BQ5T3F8 832 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 COL20A1Q9P218 1284 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
LINC00454-201ENST00000425483 TLR3O15455 904 aaKnown RBP13.29□□□□□ -0.28
LINC00454-201ENST00000425483 PPP1R11O60927 126 aaPredicted RBP13.29□□□□□ -0.28
LINC00454-201ENST00000425483 CDC45O75419 566 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 DDAH1O94760 285 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 CFBP00751 764 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 KIF5BP33176 963 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 CPT1AP50416 773 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
LINC00454-201ENST00000425483 RNF20Q5VTR2 975 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 ARHGEF16Q5VV41 709 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 TMTC2Q8N394 836 aa13.29□□□□□ -0.28
LINC00454-201ENST00000425483 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms