RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 SCN5AQ14524 2016 aa18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 XIRP2A4UGR9 3374 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 FAM86C2PA6NEL3 165 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 ICAM1P05362 532 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 ALAS1P13196 640 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 CPT1AP50416 773 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 RABGGTBP53611 331 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 PURAQ00577 322 aaKnown RBP18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 PDGFCQ9NRA1 345 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 PNMA2Q9UL42 364 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 TNKSO95271 1327 aa18.46■□□□□ 0.55
RPUSD3-204ENST00000424438 NKRFO15226 690 aaKnown RBP eCLIP18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 KPNA6O60684 536 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 TFAP4Q01664 338 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 NFRKBQ6P4R8 1299 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 FBXO16Q8IX29 292 aaPredicted RBP18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 STK11IPQ8N1F8 1099 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 SNX27Q96L92 541 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 PRR12Q9ULL5 1215 aa18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
RPUSD3-204ENST00000424438 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 ZBBXA8MT70 800 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 APPP05067 770 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 MCCP23508 829 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 PSMC6P62333 389 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 PPARAQ07869 468 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 TTLL4Q14679 1199 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 MUM1L1Q5H9M0 696 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 HLA-CQ95604 372 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 SCLYQ96I15 445 aa18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 RANBP17Q9H2T7 1088 aaKnown RBP18.44■□□□□ 0.54
RPUSD3-204ENST00000424438 M0R2C6 588 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 BAIAP3O94812 1187 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 CA3P07451 260 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 MYOGP15173 224 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 ALDH5A1P51649 535 aaPredicted RBP18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 DCAF4Q8WV16 495 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 WDR11Q9BZH6 1224 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 MAF1Q9H063 256 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 NAPBQ9H115 298 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 RAD50Q92878 1312 aa18.43■□□□□ 0.54
RPUSD3-204ENST00000424438 TLL1O43897 1013 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 SMARCA5O60264 1052 aaPredicted RBP18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 MRE11P49959 708 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 C11orf16Q9NQ32 467 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 TRMT13Q9NUP7 481 aaKnown RBP18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 TTC41PQ6P2S7 1318 aa18.42■□□□□ 0.54
RPUSD3-204ENST00000424438 A6NJR5 290 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 FGRP09769 529 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 EDNRBP24530 442 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 TAP1Q03518 808 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 ZMYM1Q5SVZ6 1142 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 NSMFQ6X4W1 530 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 KCTD1Q719H9 257 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 EEPD1Q7L9B9 569 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
RPUSD3-204ENST00000424438 TSPY2A6NKD2 308 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 PRR33A8MZF0 331 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 ORC4O43929 436 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 PARNO95453 639 aaKnown RBP18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 IQCF3P0C7M6 154 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 CYP2C9P11712 490 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 PTGS1P23219 599 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 BFSP2Q13515 415 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 TMEM63BQ5T3F8 832 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 HERC6Q8IVU3 1022 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 SCFD2Q8WU76 684 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 PTPRSQ13332 1948 aa18.4■□□□□ 0.54
RPUSD3-204ENST00000424438 PI4K2BG5E9Z4 385 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 RBL2Q08999 1139 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 BAATQ14032 418 aaPredicted RBP18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 NBPF20Q3BBV1 942 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 SESTD1Q86VW0 696 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 CAGE1Q8TC20 777 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 UIMC1Q96RL1 719 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 WDR19Q8NEZ3 1342 aa18.39■□□□□ 0.53
RPUSD3-204ENST00000424438 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
RPUSD3-204ENST00000424438 B4DLN1 442 aa18.38■□□□□ 0.53
RPUSD3-204ENST00000424438 RFXAPO00287 272 aa18.38■□□□□ 0.53
RPUSD3-204ENST00000424438 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
RPUSD3-204ENST00000424438 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms