RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MCCP23508 829 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 PURAQ00577 322 aaKnown RBP19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 TFAP4Q01664 338 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 TAP1Q03518 808 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 TMEM31Q5JXX7 168 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 RCSD1Q6JBY9 416 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 IFNL3Q8IZI9 196 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 HLA-CQ95604 372 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 LRRC37A2A6NM11 1700 aa19.89■□□□□ 0.77
CHCHD3-202ENST00000423635 LOC102724159A0A0B4J2E5 919 aa19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 RBM47A0AV96 593 aaKnown RBP19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 GPR37L1O60883 481 aa19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 PDE4BQ07343 736 aa19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 PWP2Q15269 919 aaKnown RBP19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 KRT40Q6A162 431 aa19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 PRR12Q9ULL5 1215 aa19.88■□□□□ 0.77
CHCHD3-202ENST00000423635 KIF28PB7ZC32 967 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 PITPNM1O00562 1244 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 APPP05067 770 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 IQCF3P0C7M6 154 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 CPT1AP50416 773 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 IKQ13123 557 aaPredicted RBP19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 HERC6Q8IVU3 1022 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 PURBQ96QR8 312 aaKnown RBP19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 MTG1Q9BT17 334 aaPredicted RBP19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 WDR11Q9BZH6 1224 aa19.87■□□□□ 0.77
CHCHD3-202ENST00000423635 ARHGEF15O94989 841 aa19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 KCTD1Q719H9 257 aa19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 ARNTL2Q8WYA1 636 aa19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 CHMP4BQ9H444 224 aaKnown RBP19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 ADD3Q9UEY8 706 aaKnown RBP19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 ISY1Q9ULR0 285 aaKnown RBP19.86■□□□□ 0.77
CHCHD3-202ENST00000423635 M0R2C6 588 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 SMARCA5O60264 1052 aaPredicted RBP19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 LPXNO60711 386 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 ICAM1P05362 532 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 SNAP25P60880 206 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 PTPN11Q06124 597 aaPredicted RBP19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 GRB10Q13322 594 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 NBPF20Q3BBV1 942 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 NSMFQ6X4W1 530 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 RETREG2Q8NC44 543 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 NACAP1Q9BZK3 213 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 C11orf16Q9NQ32 467 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 GPHNQ9NQX3 736 aaPredicted RBP19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 LMCD1Q9NZU5 365 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 CCPG1Q9ULG6 757 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 SCN5AQ14524 2016 aa19.85■□□□□ 0.77
CHCHD3-202ENST00000423635 BAIAP3O94812 1187 aa19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 SLC3A2P08195 630 aaKnown RBP19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 MYL3P08590 195 aa19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 ALDH5A1P51649 535 aaPredicted RBP19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 BAATQ14032 418 aaPredicted RBP19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 KHSRPQ92945 711 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■■□□ 15.2
CHCHD3-202ENST00000423635 SCN10AQ9Y5Y9 1956 aa19.84■□□□□ 0.77
CHCHD3-202ENST00000423635 PI4K2BG5E9Z4 385 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 KPNA6O60684 536 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 NOVP48745 357 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 PPARAQ07869 468 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 FTOQ9C0B1 505 aaKnown RBP eCLIP19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 RANBP17Q9H2T7 1088 aaKnown RBP19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 IL17RBQ9NRM6 502 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
CHCHD3-202ENST00000423635 LCTP09848 1927 aa19.83■□□□□ 0.76
CHCHD3-202ENST00000423635 A6NJR5 290 aa19.82■□□□□ 0.76
CHCHD3-202ENST00000423635 NKRFO15226 690 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHCHD3-202ENST00000423635 BFSP2Q13515 415 aa19.82■□□□□ 0.76
CHCHD3-202ENST00000423635 CHMP4CQ96CF2 233 aa19.82■□□□□ 0.76
CHCHD3-202ENST00000423635 LRRFIP1Q32MZ4 808 aaKnown RBP19.81■□□□□ 0.76
CHCHD3-202ENST00000423635 FAM47CQ5HY64 1035 aa19.81■□□□□ 0.76
CHCHD3-202ENST00000423635 BTNL9Q6UXG8 535 aa19.81■□□□□ 0.76
CHCHD3-202ENST00000423635 NAPBQ9H115 298 aa19.81■□□□□ 0.76
CHCHD3-202ENST00000423635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
CHCHD3-202ENST00000423635 TET1Q8NFU7 2136 aa19.8■□□□□ 0.76
CHCHD3-202ENST00000423635 RAD50Q92878 1312 aa19.8■□□□□ 0.76
CHCHD3-202ENST00000423635 TSPY2A6NKD2 308 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 NFIBO00712 420 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 GPNMBQ14956 572 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 RASGRP2Q7LDG7 609 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 SPRED2Q7Z698 418 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 DCAF4Q8WV16 495 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 GPATCH3Q96I76 525 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 SEC62Q99442 399 aaKnown RBP19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 CD320Q9NPF0 282 aa19.79■□□□□ 0.76
CHCHD3-202ENST00000423635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 NMT2O60551 498 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 EDNRBP24530 442 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 KCNJ6P48051 423 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 PPP2R5BQ15173 497 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 TTBK2Q6IQ55 1244 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 CAGE1Q8TC20 777 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 SCFD2Q8WU76 684 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 CLEC4DQ8WXI8 215 aa19.78■□□□□ 0.76
CHCHD3-202ENST00000423635 PTPDC1A2A3K4 754 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms