RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 IL27Q8NEV9 243 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 NPLOC4Q8TAT6 608 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 GPKOWQ92917 476 aaPredicted RBP eCLIP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 GTF3C6Q969F1 213 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 ZSCAN31Q96LW9 406 aaPredicted RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 PURBQ96QR8 312 aaKnown RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 CYP39A1Q9NYL5 469 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 DNAJC25-GNG10A0A024R161 153 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 OPLAHO14841 1288 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 ADCY3O60266 1144 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 HOXC6P09630 235 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 XRCC5P13010 732 aaKnown RBP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 ELNP15502 786 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 CALML3P27482 149 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 RPS6P62753 249 aaKnown RBP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 CNTN2Q02246 1040 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 ST3GAL1Q11201 340 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 IRF5Q13568 498 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 PKN1Q16512 942 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 CCL14Q16627 93 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 PFKFB3Q16875 520 aaPredicted RBP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 ZNF792Q3KQV3 632 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 WWC2Q6AWC2 1192 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 RNF207Q6ZRF8 634 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 MCF2L2Q86YR7 1114 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 RGS22Q8NE09 1264 aa10.7□□□□□ -0.7
PDGFC-202ENST00000422544 RNF26Q9BY78 433 aaPredicted RBP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 SH2B1Q9NRF2 756 aaPredicted RBP10.7□□□□□ -0.7
PDGFC-202ENST00000422544 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 PFASO15067 1338 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 CDKL5O76039 1030 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 CFBP00751 764 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 SCG2P13521 617 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 MCM2P49736 904 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 SLC30A10Q6XR72 485 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 SH3TC2Q8TF17 1288 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 TMX3Q96JJ7 454 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 APBA2Q99767 749 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 SLC5A4Q9NY91 659 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
PDGFC-202ENST00000422544 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
PDGFC-202ENST00000422544 COL11A1P12107 1806 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 GCOM1H8Y6P7 765 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 STXBP3O00186 592 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 JAK2O60674 1132 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 POLR2MP0CAP2 368 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 FDPSP14324 419 aaKnown RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 HOXA13P31271 388 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 GRK4P32298 578 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 NAPAP54920 295 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 FAM133AQ8N9E0 248 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 NSUN7Q8NE18 718 aaKnown RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 TRIB2Q92519 343 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 ARMC5Q96C12 935 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 MAML3Q96JK9 1138 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 FGD4Q96M96 766 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 AIFM3Q96NN9 605 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 PSTPIP2Q9H939 334 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 BARHL2Q9NY43 387 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 COL20A1Q9P218 1284 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 BIN2Q9UBW5 565 aaPredicted RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
PDGFC-202ENST00000422544 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
PDGFC-202ENST00000422544 SMCHD1A6NHR9 2005 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 SMCO2A6NFE2 343 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 DEXIO95424 95 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 MYCP01106 439 aaPredicted RBP10.67□□□□□ -0.7
PDGFC-202ENST00000422544 CYP2C19P33261 490 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 HSD17B4P51659 736 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 TRIM32Q13049 653 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 SLC9C1Q4G0N8 1177 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 OLFML2BQ68BL8 750 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 USP17L6PQ6QN14 398 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 FCHSD1Q86WN1 690 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 SHISA4Q96DD7 197 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 TAAR1Q96RJ0 339 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 MAF1Q9H063 256 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 VPS54Q9P1Q0 977 aa10.67□□□□□ -0.7
PDGFC-202ENST00000422544 DDX49Q9Y6V7 483 aaKnown RBP10.67□□□□□ -0.7
PDGFC-202ENST00000422544 ASTN1O14525 1302 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 MUC3AQ02505 3323 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 hCG_1984214I3L0E3 225 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 MEIS2O14770 477 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 IGHA2P01877 340 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 HMGCRP04035 888 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms