RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RPS6P62753 249 aaKnown RBP18.04■□□□□ 0.48
DDX55-203ENST00000421670 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 RNF207Q6ZRF8 634 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 MCF2L2Q86YR7 1114 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 RASGRP4Q8TDF6 673 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 MMP19Q99542 508 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 CYP39A1Q9NYL5 469 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 IVNS1ABPQ9Y6Y0 642 aa18.04■□□□□ 0.48
DDX55-203ENST00000421670 VPS37CA5D8V6 355 aaPredicted RBP18.03■□□□□ 0.48
DDX55-203ENST00000421670 FCER1AP12319 257 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 PDCP20941 246 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 CALML3P27482 149 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 GNA11P29992 359 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 HSD17B4P51659 736 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
DDX55-203ENST00000421670 KCTD2Q14681 263 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 PLEKHH3Q7Z736 793 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 CD99L2Q8TCZ2 262 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
DDX55-203ENST00000421670 TRIM47Q96LD4 638 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 PURBQ96QR8 312 aaKnown RBP18.03■□□□□ 0.48
DDX55-203ENST00000421670 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 PCDHA4Q9UN74 947 aa18.03■□□□□ 0.48
DDX55-203ENST00000421670 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 TNPO2O14787 897 aaKnown RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 PGK2P07205 417 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 PSMC4P43686 418 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDX55-203ENST00000421670 DIS3L2Q8IYB7 885 aaKnown RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 BLIDQ8IZY5 108 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 PGBD1Q96JS3 809 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 TMEM260Q9NX78 707 aa18.02■□□□□ 0.48
DDX55-203ENST00000421670 BIN2Q9UBW5 565 aaPredicted RBP18.02■□□□□ 0.48
DDX55-203ENST00000421670 PFASO15067 1338 aa18.02■□□□□ 0.47
DDX55-203ENST00000421670 PIK3CDO00329 1044 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 PTPREP23469 700 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 ADORA2AP29274 412 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 KRT2P35908 639 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 CLK2P49760 499 aaKnown RBP18.01■□□□□ 0.47
DDX55-203ENST00000421670 FCGRTP55899 365 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 GHRHRQ02643 423 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 NR5A1Q13285 461 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 PKP1Q13835 747 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 GRB14Q14449 540 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 FCHSD1Q86WN1 690 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 DAGLBQ8NCG7 672 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
DDX55-203ENST00000421670 BTBD18B2RXH4 712 aa18■□□□□ 0.47
DDX55-203ENST00000421670 M0R2N6 131 aa18■□□□□ 0.47
DDX55-203ENST00000421670 STX6O43752 255 aa18■□□□□ 0.47
DDX55-203ENST00000421670 FKTNO75072 461 aa18■□□□□ 0.47
DDX55-203ENST00000421670 CNTN2Q02246 1040 aa18■□□□□ 0.47
DDX55-203ENST00000421670 KIF22Q14807 665 aa18■□□□□ 0.47
DDX55-203ENST00000421670 NOM1Q5C9Z4 860 aaKnown RBP18■□□□□ 0.47
DDX55-203ENST00000421670 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
DDX55-203ENST00000421670 GALNT17Q6IS24 598 aa18■□□□□ 0.47
DDX55-203ENST00000421670 RGS22Q8NE09 1264 aa18■□□□□ 0.47
DDX55-203ENST00000421670 SYTL5Q8TDW5 730 aaPredicted RBP18■□□□□ 0.47
DDX55-203ENST00000421670 BRMS1Q9HCU9 246 aa18■□□□□ 0.47
DDX55-203ENST00000421670 KIF28PB7ZC32 967 aa18■□□□□ 0.47
DDX55-203ENST00000421670 FOXN1O15353 648 aa18■□□□□ 0.47
DDX55-203ENST00000421670 STRNO43815 780 aa18■□□□□ 0.47
DDX55-203ENST00000421670 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
DDX55-203ENST00000421670 MCTP1Q6DN14 999 aa18■□□□□ 0.47
DDX55-203ENST00000421670 ABRAQ8N0Z2 381 aa18■□□□□ 0.47
DDX55-203ENST00000421670 GLT8D2Q9H1C3 349 aa18■□□□□ 0.47
DDX55-203ENST00000421670 PCDHA6Q9UN73 950 aa18■□□□□ 0.47
DDX55-203ENST00000421670 MTMR6Q9Y217 621 aa18■□□□□ 0.47
DDX55-203ENST00000421670 PCDHA8Q9Y5H6 950 aa18■□□□□ 0.47
DDX55-203ENST00000421670 KIAA1217Q5T5P2 1943 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 SLC15A5A6NIM6 579 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 POTEB2H3BUK9 544 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 HSPA1AP0DMV8 641 aaKnown RBP17.99■□□□□ 0.47
DDX55-203ENST00000421670 HSPA1BP0DMV9 641 aaKnown RBP17.99■□□□□ 0.47
DDX55-203ENST00000421670 MORN1Q5T089 497 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 ASTN1O14525 1302 aa17.99■□□□□ 0.47
DDX55-203ENST00000421670 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 SPDYE3A6NKU9 549 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 COBLO75128 1261 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 DDIT3P35638 169 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 UBXN2AP68543 259 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 EARS2Q5JPH6 523 aaKnown RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 FOXD4L5Q5VV16 416 aaPredicted RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 FAM133AQ8N9E0 248 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 FOXD4L4Q8WXT5 416 aaPredicted RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 ERO1AQ96HE7 468 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 TAAR1Q96RJ0 339 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 DDX49Q9Y6V7 483 aaKnown RBP17.98■□□□□ 0.47
DDX55-203ENST00000421670 BRCA2P51587 3418 aa17.98■□□□□ 0.47
DDX55-203ENST00000421670 HSPA8P11142 646 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms