RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 LAMA4Q16363 1823 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 RPS6KA5O75582 802 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 DEFB132Q7Z7B7 95 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 KIAA1328Q86T90 577 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 SPICE1Q8N0Z3 855 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 MYO6Q9UM54 1294 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 CCDC151A5D8V7 595 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 RAD17O75943 681 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 PYGLP06737 847 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 AOC3Q16853 763 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 CEP112Q8N8E3 955 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 GJA10Q969M2 543 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 FLT1P17948 1338 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 NLRP12P59046 1061 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 FOXP4Q8IVH2 680 aaPredicted RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 H0YIN7 160 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 AKR1B1P15121 316 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 RCSD1Q6JBY9 416 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 NFE2L3Q9Y4A8 694 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 RNF40O75150 1001 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 SETSIPP0DME0 302 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 RASA1P20936 1047 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 RPS6KA3P51812 740 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 FANCCQ00597 558 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 EZH2Q15910 746 aaKnown RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 DPF2Q92785 391 aa16.14■□□□□ 0.17
CHRD-204ENST00000420973 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
CHRD-204ENST00000420973 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
CHRD-204ENST00000420973 UBA7P41226 1012 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 FAM71BQ8TC56 605 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 ZHX3Q9H4I2 956 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 ATRNO75882 1429 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 RXRBP28702 533 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 CCT6AP40227 531 aaKnown RBP16.13■□□□□ 0.17
CHRD-204ENST00000420973 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 ZNF287Q9HBT7 754 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 TMEM165Q9HC07 324 aa16.13■□□□□ 0.17
CHRD-204ENST00000420973 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
CHRD-204ENST00000420973 FBXO2Q9UK22 296 aaPredicted RBP16.13■□□□□ 0.17
CHRD-204ENST00000420973 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 TXLNAP40222 546 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 TXKP42681 527 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 RESP18Q5W5W9 173 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 RABGGTAQ92696 567 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
CHRD-204ENST00000420973 MYH13Q9UKX3 1938 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 TCP10L2B9ZVM9 353 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 ADRA2BP18089 450 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 USP4Q13107 963 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 BRD3Q15059 726 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 RRAGBQ5VZM2 374 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
CHRD-204ENST00000420973 TDRD3Q9H7E2 651 aaKnown RBP16.12■□□□□ 0.17
CHRD-204ENST00000420973 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 PPP6R2O75170 966 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 PTPREP23469 700 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 MYL5Q02045 173 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 USH1GQ495M9 461 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
CHRD-204ENST00000420973 YIPF3Q9GZM5 350 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 ABCB6Q9NP58 842 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 ANAPC4Q9UJX5 808 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHRD-204ENST00000420973 DDAH1O94760 285 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 STAT6P42226 847 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 KCNB1Q14721 858 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 UBE2SQ16763 222 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 RMI1Q9H9A7 625 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 CHCHD3Q9NX63 227 aaKnown RBP16.11■□□□□ 0.17
CHRD-204ENST00000420973 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
CHRD-204ENST00000420973 CDC25BP30305 580 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 ABCD1P33897 745 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 C3orf20Q8ND61 904 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
CHRD-204ENST00000420973 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
CHRD-204ENST00000420973 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
CHRD-204ENST00000420973 A0A087X0B3 334 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 IDEP14735 1019 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PREPLQ4J6C6 727 aaPredicted RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 SLC27A3Q5K4L6 730 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 RRP36Q96EU6 259 aaKnown RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PSDA5PKW4 1024 aaPredicted RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 CYTH3O43739 400 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms