RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
SNAP47-204ENST00000418653 REPS2Q8NFH8 660 aa13.69□□□□□ -0.22
SNAP47-204ENST00000418653 NEUROD6Q96NK8 337 aa13.69□□□□□ -0.22
SNAP47-204ENST00000418653 RRAGDQ9NQL2 400 aaPredicted RBP13.69□□□□□ -0.22
SNAP47-204ENST00000418653 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
SNAP47-204ENST00000418653 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
SNAP47-204ENST00000418653 ADHFE1Q8IWW8 467 aa13.68□□□□□ -0.22
SNAP47-204ENST00000418653 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
SNAP47-204ENST00000418653 SCLYQ96I15 445 aa13.68□□□□□ -0.22
SNAP47-204ENST00000418653 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
SNAP47-204ENST00000418653 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
SNAP47-204ENST00000418653 VWA5AO00534 786 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 CLCN1P35523 988 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
SNAP47-204ENST00000418653 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
SNAP47-204ENST00000418653 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
SNAP47-204ENST00000418653 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 TRPV6Q9H1D0 765 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 HSPA4P34932 840 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 ERVK-21P61565 698 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
SNAP47-204ENST00000418653 MTX1Q13505 466 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 KATNBL1Q9H079 304 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
SNAP47-204ENST00000418653 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 USP34Q70CQ2 3546 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
SNAP47-204ENST00000418653 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
SNAP47-204ENST00000418653 COL19A1Q14993 1142 aa13.66□□□□□ -0.22
SNAP47-204ENST00000418653 FSCN1Q16658 493 aaKnown RBP13.66□□□□□ -0.22
SNAP47-204ENST00000418653 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
SNAP47-204ENST00000418653 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
SNAP47-204ENST00000418653 Q9Y3F1 56 aa13.66□□□□□ -0.22
SNAP47-204ENST00000418653 ZFHX2Q9C0A1 2572 aaPredicted RBP13.66□□□□□ -0.22
SNAP47-204ENST00000418653 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 ESPNB1AK53 854 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 SGSM2O43147 1006 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 DYNLL1P63167 89 aaKnown RBP13.65□□□□□ -0.22
SNAP47-204ENST00000418653 TCF15Q12870 199 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 ARMCX2Q7L311 632 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 TGS1Q96RS0 853 aaKnown RBP13.65□□□□□ -0.22
SNAP47-204ENST00000418653 SWAP70Q9UH65 585 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 GNEQ9Y223 722 aaKnown RBP13.65□□□□□ -0.22
SNAP47-204ENST00000418653 CACNA1BQ00975 2339 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 ASTN1O14525 1302 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 RAD50Q92878 1312 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 PROB1E7EW31 1015 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 BRD1O95696 1058 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 KCNJ6P48051 423 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 ICA1Q05084 483 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 PKP1Q13835 747 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
SNAP47-204ENST00000418653 HIP1O00291 1037 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 MPHOSPH10O00566 681 aaKnown RBP13.64□□□□□ -0.23
SNAP47-204ENST00000418653 CYP7A1P22680 504 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 PLCD1P51178 756 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 NUBP1P53384 320 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 BEX3Q00994 111 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 TNFAIP2Q03169 654 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
SNAP47-204ENST00000418653 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
SNAP47-204ENST00000418653 FGD4Q96M96 766 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 PPP1R9BQ96SB3 815 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 AP5M1Q9H0R1 490 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 GPR108Q9NPR9 543 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 ECHDC1Q9NTX5 307 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
SNAP47-204ENST00000418653 SCN10AQ9Y5Y9 1956 aa13.64□□□□□ -0.23
SNAP47-204ENST00000418653 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
SNAP47-204ENST00000418653 SUGP1Q8IWZ8 645 aaKnown RBP13.63□□□□□ -0.23
SNAP47-204ENST00000418653 EDAQ92838 391 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 FAM186AA6NE01 2351 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 IRS1P35568 1242 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNAP47-204ENST00000418653 PTPROQ16827 1216 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 SPICE1Q8N0Z3 855 aa13.63□□□□□ -0.23
SNAP47-204ENST00000418653 MRPL38Q96DV4 380 aaKnown RBP13.63□□□□□ -0.23
SNAP47-204ENST00000418653 PTPRZ1P23471 2315 aaPredicted RBP13.63□□□□□ -0.23
SNAP47-204ENST00000418653 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
SNAP47-204ENST00000418653 NCK2O43639 380 aa13.62□□□□□ -0.23
SNAP47-204ENST00000418653 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
SNAP47-204ENST00000418653 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
SNAP47-204ENST00000418653 SIAH1Q8IUQ4 282 aa13.62□□□□□ -0.23
SNAP47-204ENST00000418653 CCDC17Q96LX7 622 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms