RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NCAPH2Q6IBW4 605 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 MYCBPAPQ8TBZ2 947 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.026e-7■■■■■ 166.4
SIK3-203ENST00000415541 PRDX5P30044 214 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 EPHB4P54760 987 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 NLRP5P59047 1200 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 MXRA7P84157 204 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 XRCC4Q13426 336 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 ZRSR2Q15696 482 aaKnown RBP8.65□□□□□ -1.02
SIK3-203ENST00000415541 CCDC96Q2M329 555 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 GNPTABQ3T906 1256 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 EMBQ6PCB8 327 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 C2CD5Q86YS7 1000 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 LMNTD2Q8IXW0 634 aa8.65□□□□□ -1.02
SIK3-203ENST00000415541 MOV10L1Q9BXT6 1211 aaKnown RBP8.65□□□□□ -1.02
SIK3-203ENST00000415541 ZNF142P52746 1687 aaPredicted RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 A0A0G2JLW4 131 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 STXBP3O00186 592 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 CREB3O43889 395 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 MGRN1O60291 552 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 TPP2P29144 1249 aaPredicted RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 EIF6P56537 245 aaKnown RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 RBM26Q5T8P6 1007 aaKnown RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 TSGA10Q9BZW7 698 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 EBF2Q9HAK2 575 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 CTDP1Q9Y5B0 961 aaPredicted RBP8.65□□□□□ -1.03
SIK3-203ENST00000415541 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.03
SIK3-203ENST00000415541 DNAJC8O75937 253 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 ANP32DO95626 131 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 GNAT1P11488 350 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 NR1D1P20393 614 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 BAG6P46379 1132 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 TCP10Q12799 353 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 C1QTNF12Q5T7M4 302 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 C3orf67Q6ZVT6 689 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 NCAPG2Q86XI2 1143 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 TMTC2Q8N394 836 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 CCDC63Q8NA47 563 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 ANKRD27Q96NW4 1050 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 ZFATQ9P243 1243 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 USP42Q9H9J4 1324 aaKnown RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 ATP2C2O75185 946 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 PYGLP06737 847 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 GHRP10912 638 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 CMA1P23946 247 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 PPARAQ07869 468 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 ACBD5Q5T8D3 534 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 ANKS4BQ8N8V4 417 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 ZFAND2BQ8WV99 257 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 IQCGQ9H095 443 aaKnown RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 LMO7Q8WWI1 1683 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 MDH1P40925 334 aaKnown RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 SFSWAPQ12872 951 aaKnown RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 GRAPQ13588 217 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 MTF1Q14872 753 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 ANKRD20A8PQ5CZ79 823 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 KIAA0825Q8IV33 1275 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
SIK3-203ENST00000415541 CTAGE1Q96RT6 745 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 PCDHGC5Q9Y5F6 944 aa8.64□□□□□ -1.03
SIK3-203ENST00000415541 XDHP47989 1333 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 CFAP73A6NFT4 308 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 SCTRP47872 440 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 TOB2Q14106 344 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 CYP26C1Q6V0L0 522 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 PNMA8AQ86V59 439 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 MYLK4Q86YV6 388 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 STAMBPL1Q96FJ0 436 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 EYA3Q99504 573 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 FTOQ9C0B1 505 aaKnown RBP eCLIP8.63□□□□□ -1.03
SIK3-203ENST00000415541 G3BP2Q9UN86 482 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 GMNCA6NCL1 334 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 HMGB1P1B2RPK0 211 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 B4DLN1 442 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 PDIA3P30101 505 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 VAV2P52735 878 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 HDLBPQ00341 1268 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 RIPK1Q13546 671 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 HVCN1Q96D96 273 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 CYFIP2Q96F07 1278 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 HAUS4Q9H6D7 363 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 DBNDD1Q9H9R9 158 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 TUBE1Q9UJT0 475 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
SIK3-203ENST00000415541 ZMYND10O75800 440 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
SIK3-203ENST00000415541 CNGA1P29973 690 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms