RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 EXOSC10Q01780 885 aaKnown RBP20.25■□□□□ 0.83
HSPG2-204ENST00000412328 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
HSPG2-204ENST00000412328 SGMS1Q86VZ5 419 aa20.25■□□□□ 0.83
HSPG2-204ENST00000412328 TBC1D5Q92609 795 aa20.25■□□□□ 0.83
HSPG2-204ENST00000412328 SENP6Q9GZR1 1112 aaPredicted RBP20.25■□□□□ 0.83
HSPG2-204ENST00000412328 PTPDC1A2A3K4 754 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 TMEM63BQ5T3F8 832 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 LRRC2Q9BYS8 371 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 VTA1Q9NP79 307 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 PDGFCQ9NRA1 345 aa20.24■□□□□ 0.83
HSPG2-204ENST00000412328 COLQQ9Y215 455 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-204ENST00000412328 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
HSPG2-204ENST00000412328 CALML3P27482 149 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 HSPA4P34932 840 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 ADCYAP1R1P41586 468 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 GJA9P57773 515 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 C1orf53Q5VUE5 145 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 SYTL5Q8TDW5 730 aaPredicted RBP20.23■□□□□ 0.83
HSPG2-204ENST00000412328 PIGSQ96S52 555 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 NR2E3Q9Y5X4 410 aa20.23■□□□□ 0.83
HSPG2-204ENST00000412328 SZT2Q5T011 3432 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 A0A1W2PQ45 241 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-204ENST00000412328 A0A1W2PQY0 241 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 RBM47A0AV96 593 aaKnown RBP20.22■□□□□ 0.83
HSPG2-204ENST00000412328 SMPD1P17405 629 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 HSD17B4P51659 736 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 RNF20Q5VTR2 975 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 DNERQ8NFT8 737 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
HSPG2-204ENST00000412328 ADD3Q9UEY8 706 aaKnown RBP20.22■□□□□ 0.83
HSPG2-204ENST00000412328 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
HSPG2-204ENST00000412328 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 ATN1P54259 1190 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-204ENST00000412328 RTP1P59025 263 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 CHRDL2Q6WN34 429 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 SLC39A5Q6ZMH5 540 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 EEPD1Q7L9B9 569 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 RNF180Q86T96 592 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 TCEANC2Q96MN5 208 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 TSEN34Q9BSV6 310 aaKnown RBP20.21■□□□□ 0.83
HSPG2-204ENST00000412328 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
HSPG2-204ENST00000412328 RXRAP19793 462 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 ACLYP53396 1101 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
HSPG2-204ENST00000412328 HOMER1Q86YM7 354 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 NUP133Q8WUM0 1156 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 GDF15Q99988 308 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 ZMYND8Q9ULU4 1186 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-204ENST00000412328 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
HSPG2-204ENST00000412328 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 NID2Q14112 1375 aa20.2■□□□□ 0.82
HSPG2-204ENST00000412328 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 TRIM60Q495X7 471 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 APOA5Q6Q788 366 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 DHX32Q7L7V1 743 aaKnown RBP20.19■□□□□ 0.82
HSPG2-204ENST00000412328 TLK2Q86UE8 772 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
HSPG2-204ENST00000412328 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 TAAR1Q96RJ0 339 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
HSPG2-204ENST00000412328 PCDHA1Q9Y5I3 950 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 FRMPD4Q14CM0 1322 aa20.19■□□□□ 0.82
HSPG2-204ENST00000412328 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 MOXD2PA6NHM9 499 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 SYN1P17600 705 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 KCNA10Q16322 511 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 RAB11FIP4Q86YS3 637 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 TMTC2Q8N394 836 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 CTCFLQ8NI51 663 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-204ENST00000412328 BRPF3Q9ULD4 1205 aa20.18■□□□□ 0.82
HSPG2-204ENST00000412328 CCDC69A6NI79 296 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
HSPG2-204ENST00000412328 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-204ENST00000412328 C6orf222P0C671 652 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-204ENST00000412328 CPA1P15085 419 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 KRT32Q14532 448 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 DUSP28Q4G0W2 176 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 IQSEC1Q6DN90 963 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 PDLIM7Q9NR12 457 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 Q9Y3F1 56 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
HSPG2-204ENST00000412328 ARIH2O95376 493 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 ASGR1P07306 291 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 CALM1P0DP23 149 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 CALM2P0DP24 149 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 CALM3P0DP25 149 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 KIF5BP33176 963 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 BEX3Q00994 111 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 FUT2Q10981 343 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 NFXL1Q6ZNB6 911 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 MICU3Q86XE3 530 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms