RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 RAD50Q92878 1312 aa26.13■■□□□ 1.77
MSH6-202ENST00000411819 TLR3O15455 904 aaKnown RBP26.12■■□□□ 1.77
MSH6-202ENST00000411819 ZEB2O60315 1214 aa26.12■■□□□ 1.77
MSH6-202ENST00000411819 NKX3-2P78367 333 aa26.12■■□□□ 1.77
MSH6-202ENST00000411819 CDC37Q16543 378 aaPredicted RBP26.12■■□□□ 1.77
MSH6-202ENST00000411819 RNPC3Q96LT9 517 aaKnown RBP26.12■■□□□ 1.77
MSH6-202ENST00000411819 FAM161BQ96MY7 647 aa26.12■■□□□ 1.77
MSH6-202ENST00000411819 DHX16O60231 1041 aaKnown RBP26.11■■□□□ 1.77
MSH6-202ENST00000411819 CDK7P50613 346 aa26.11■■□□□ 1.77
MSH6-202ENST00000411819 RPS6P62753 249 aaKnown RBP26.11■■□□□ 1.77
MSH6-202ENST00000411819 ASPRV1Q53RT3 343 aa26.11■■□□□ 1.77
MSH6-202ENST00000411819 TMEM63BQ5T3F8 832 aa26.11■■□□□ 1.77
MSH6-202ENST00000411819 MPHOSPH6Q99547 160 aaKnown RBP26.11■■□□□ 1.77
MSH6-202ENST00000411819 TBX21Q9UL17 535 aa26.11■■□□□ 1.77
MSH6-202ENST00000411819 LOC102724159A0A0B4J2E5 919 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 CABYRO75952 493 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 EPHB4P54760 987 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 PDE4DQ08499 809 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 PWP2Q15269 919 aaKnown RBP26.1■■□□□ 1.77
MSH6-202ENST00000411819 ZNF697Q5TEC3 545 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 RUFY2Q8WXA3 655 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 ANKS1AQ92625 1134 aa26.1■■□□□ 1.77
MSH6-202ENST00000411819 TIMP1P01033 207 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 PARP1P09874 1014 aaKnown RBP26.09■■□□□ 1.77
MSH6-202ENST00000411819 IFIT1BQ5T764 474 aaKnown RBP26.09■■□□□ 1.77
MSH6-202ENST00000411819 FAM126BQ8IXS8 530 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 ADGRF4Q8IZF3 695 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 WDR11Q9BZH6 1224 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 PPP1R12CQ9BZL4 782 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 Q9Y3F1 56 aa26.09■■□□□ 1.77
MSH6-202ENST00000411819 DUSP28Q4G0W2 176 aa26.08■■□□□ 1.77
MSH6-202ENST00000411819 FAM109BQ6ICB4 259 aaPredicted RBP26.08■■□□□ 1.77
MSH6-202ENST00000411819 STXBP5LQ9Y2K9 1186 aa26.08■■□□□ 1.77
MSH6-202ENST00000411819 TRDNQ13061 729 aa26.07■■□□□ 1.76
MSH6-202ENST00000411819 ITGA7Q13683 1181 aa26.07■■□□□ 1.76
MSH6-202ENST00000411819 SLC17A8Q8NDX2 589 aa26.07■■□□□ 1.76
MSH6-202ENST00000411819 DNERQ8NFT8 737 aa26.07■■□□□ 1.76
MSH6-202ENST00000411819 ABCB11O95342 1321 aa26.07■■□□□ 1.76
MSH6-202ENST00000411819 CHMLP26374 656 aa26.06■■□□□ 1.76
MSH6-202ENST00000411819 MFSD5Q6N075 450 aa26.06■■□□□ 1.76
MSH6-202ENST00000411819 VAT1LQ9HCJ6 419 aa26.06■■□□□ 1.76
MSH6-202ENST00000411819 B4DLN1 442 aa26.05■■□□□ 1.76
MSH6-202ENST00000411819 MRPL12P52815 198 aaKnown RBP26.05■■□□□ 1.76
MSH6-202ENST00000411819 PSMC6P62333 389 aa26.05■■□□□ 1.76
MSH6-202ENST00000411819 SMAD3P84022 425 aaKnown RBP26.05■■□□□ 1.76
MSH6-202ENST00000411819 PPIGQ13427 754 aaKnown RBP eCLIP26.05■■□□□ 1.76
MSH6-202ENST00000411819 PPP2R5BQ15173 497 aa26.05■■□□□ 1.76
MSH6-202ENST00000411819 QRICH1Q2TAL8 776 aa26.05■■□□□ 1.76
MSH6-202ENST00000411819 OR6J1Q8NGC5 347 aa26.05■■□□□ 1.76
MSH6-202ENST00000411819 EDNRBP24530 442 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 PTH1RQ03431 593 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 CYB5R4Q7L1T6 521 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 TMEM199Q8N511 208 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 SLC43A3Q8NBI5 491 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 GUCD1Q96NT3 240 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 U3KPZ7 1027 aaPredicted RBP26.04■■□□□ 1.76
MSH6-202ENST00000411819 COL6A3P12111 3177 aa26.04■■□□□ 1.76
MSH6-202ENST00000411819 RBM47A0AV96 593 aaKnown RBP26.03■■□□□ 1.76
MSH6-202ENST00000411819 CD4P01730 458 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 CSF2RAP15509 400 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 CPT1AP50416 773 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 FBXO11Q86XK2 927 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 RGS22Q8NE09 1264 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 SCFD2Q8WU76 684 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 JMJD4Q9H9V9 463 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 POLR3EQ9NVU0 708 aa26.03■■□□□ 1.76
MSH6-202ENST00000411819 LAMA2P24043 3122 aaKnown RBP26.03■■□□□ 1.76
MSH6-202ENST00000411819 MYL3P08590 195 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 CYP21A2P08686 494 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 SEC23AQ15436 765 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 RALYLQ86SE5 291 aaKnown RBP26.02■■□□□ 1.76
MSH6-202ENST00000411819 STAG2Q8N3U4 1231 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 TBC1D5Q92609 795 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.02■■□□□ 1.76
MSH6-202ENST00000411819 MRPL11Q9Y3B7 192 aaKnown RBP26.02■■□□□ 1.76
MSH6-202ENST00000411819 GRIN2DO15399 1336 aa26.02■■□□□ 1.76
MSH6-202ENST00000411819 NKRFO15226 690 aaKnown RBP eCLIP26.01■■□□□ 1.75
MSH6-202ENST00000411819 CYP2C18P33260 490 aa26.01■■□□□ 1.75
MSH6-202ENST00000411819 BRDTQ58F21 947 aaPredicted RBP26.01■■□□□ 1.75
MSH6-202ENST00000411819 MCF2L2Q86YR7 1114 aa26.01■■□□□ 1.75
MSH6-202ENST00000411819 SEZ6LQ9BYH1 1024 aa26.01■■□□□ 1.75
MSH6-202ENST00000411819 HIPK3Q9H422 1215 aa26.01■■□□□ 1.75
MSH6-202ENST00000411819 GPHNQ9NQX3 736 aaPredicted RBP26.01■■□□□ 1.75
MSH6-202ENST00000411819 ERICH2A1L162 156 aa26■■□□□ 1.75
MSH6-202ENST00000411819 KLRF2D3W0D1 207 aa26■■□□□ 1.75
MSH6-202ENST00000411819 B4GALT4O60513 344 aa26■■□□□ 1.75
MSH6-202ENST00000411819 TXNP10599 105 aaKnown RBP26■■□□□ 1.75
MSH6-202ENST00000411819 SYTL5Q8TDW5 730 aaPredicted RBP26■■□□□ 1.75
MSH6-202ENST00000411819 COPS5Q92905 334 aa26■■□□□ 1.75
MSH6-202ENST00000411819 TRPV6Q9H1D0 765 aa26■■□□□ 1.75
MSH6-202ENST00000411819 IFIT3O14879 490 aaKnown RBP25.99■■□□□ 1.75
MSH6-202ENST00000411819 SGSM2O43147 1006 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 ACRP10323 421 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 PURAQ00577 322 aaKnown RBP25.99■■□□□ 1.75
MSH6-202ENST00000411819 TTLL4Q14679 1199 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 PSRC1Q6PGN9 363 aaPredicted RBP25.99■■□□□ 1.75
MSH6-202ENST00000411819 TAAR1Q96RJ0 339 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 AMNQ9BXJ7 453 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 MAF1Q9H063 256 aa25.99■■□□□ 1.75
MSH6-202ENST00000411819 COL20A1Q9P218 1284 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms