RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
SNX13-202ENST00000409604 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 KRT13P13646 458 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 OSTNP61366 133 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 CCL15Q16663 113 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 ATRNO75882 1429 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 FOXN1O15353 648 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 AKR1B10O60218 316 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 SBK1Q52WX2 424 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 ZNF397Q8NF99 534 aaPredicted RBP12.73□□□□□ -0.37
SNX13-202ENST00000409604 BHMT2Q9H2M3 363 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
SNX13-202ENST00000409604 NOP2P46087 812 aaKnown RBP12.72□□□□□ -0.37
SNX13-202ENST00000409604 CCNA1P78396 465 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 SRRTQ9BXP5 876 aaKnown RBP12.72□□□□□ -0.37
SNX13-202ENST00000409604 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
SNX13-202ENST00000409604 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 CAP2P40123 477 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 RHBDL3P58872 404 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 FMR1Q06787 632 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNX13-202ENST00000409604 KIF22Q14807 665 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 BRDTQ58F21 947 aaPredicted RBP12.72□□□□□ -0.37
SNX13-202ENST00000409604 PGK2P07205 417 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 VCPKMTQ9H867 229 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 JMJD4Q9H9V9 463 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 ZNF541Q9H0D2 1346 aa12.72□□□□□ -0.37
SNX13-202ENST00000409604 EXOC3O60645 756 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 PLCG1P19174 1290 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 MYL5Q02045 173 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
SNX13-202ENST00000409604 RGL1Q9NZL6 768 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
SNX13-202ENST00000409604 SHMT1P34896 483 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 CETN1Q12798 172 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 COG2Q14746 738 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 DPCR1Q3MIW9 517 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 HPS3Q969F9 1004 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 CEP170P1Q96L14 293 aa12.71□□□□□ -0.37
SNX13-202ENST00000409604 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.37
SNX13-202ENST00000409604 CLIC2O15247 247 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 KRT19P08727 400 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 TBC1D8BQ0IIM8 1120 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 ODR4Q5SWX8 454 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 IFT74Q96LB3 600 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.38
SNX13-202ENST00000409604 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.38
SNX13-202ENST00000409604 E9PMD0 336 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 CMA1P23946 247 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 GRIN1Q05586 938 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 PDXDC2PQ6P474 469 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 NELFBQ8WX92 580 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 CLMNQ96JQ2 1002 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 BARHL2Q9NY43 387 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 SRGAP2CP0DJJ0 459 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 CYP2C8P10632 490 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 GJC1P36383 396 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 POLGP54098 1239 aaPredicted RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 GOLGA8FQ08AF8 430 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 GOLGA8DPQ0D2H9 430 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 ANKRD26Q9UPS8 1709 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 POTEB3A0JP26 581 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 POTECB2RU33 542 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 SMTNP53814 917 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 SPA17Q15506 151 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 PTPROQ16827 1216 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
SNX13-202ENST00000409604 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 FAM205AQ6ZU69 1335 aa12.7□□□□□ -0.38
SNX13-202ENST00000409604 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 INO80B-WBP1J3KQ70 363 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 NFKBIEO00221 500 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 MTMR1Q13613 665 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms