RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PRSS53Q2L4Q9 553 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
PMS1-203ENST00000409593 HIRIP3Q9BW71 556 aaPredicted RBP6.43□□□□□ -1.38
PMS1-203ENST00000409593 ETV2O00321 342 aaPredicted RBP6.42□□□□□ -1.38
PMS1-203ENST00000409593 PEX10O60683 326 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 TSPAN15O95858 294 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 C1QTNF9P0C862 333 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 HOXC12P31275 282 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 VIPR1P32241 457 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 TMEM62Q0P6H9 643 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 SF1Q15637 639 aaKnown RBP6.42□□□□□ -1.38
PMS1-203ENST00000409593 MBLAC2Q68D91 279 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 CABP7Q86V35 215 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 SGPP1Q9BX95 441 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 SIRT5Q9NXA8 310 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 BTG4Q9NY30 223 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 A0A1W2PQU0 124 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 C7orf72A4D263 438 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 TCAF2A6NFQ2 919 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 NPHS1O60500 1241 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 SEMA7AO75326 666 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 RPTNQ6XPR3 784 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 LZTR1Q8N653 840 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
PMS1-203ENST00000409593 USP33Q8TEY7 942 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 FRS2Q8WU20 508 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 KLHL14Q9P2G3 628 aa6.42□□□□□ -1.38
PMS1-203ENST00000409593 IQCA1LA6NCM1 817 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 ABLIM1O14639 778 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 MEFVO15553 781 aaPredicted RBP6.41□□□□□ -1.38
PMS1-203ENST00000409593 DBHP09172 617 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 GRIA2P42262 883 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 GFRA1P56159 465 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 CYP4F3Q08477 520 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 ST13P5Q8NFI4 369 aaPredicted RBP6.41□□□□□ -1.38
PMS1-203ENST00000409593 NPLOC4Q8TAT6 608 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 MMP19Q99542 508 aa6.41□□□□□ -1.38
PMS1-203ENST00000409593 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
PMS1-203ENST00000409593 TEX51A0A1B0GUA7 166 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 HRKO00198 91 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 CPP00450 1065 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 DLG4P78352 724 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 INF2Q27J81 1249 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 PLEKHN1Q494U1 663 aaPredicted RBP6.4□□□□□ -1.38
PMS1-203ENST00000409593 NBPF6Q5VWK0 638 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 TMEM145Q8NBT3 493 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 PMFBP1Q8TBY8 1022 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 ARMC5Q96C12 935 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 NBPF4Q96M43 638 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 IER2Q9BTL4 223 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 RXFP1Q9HBX9 757 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 MARCH2Q9P0N8 246 aa6.4□□□□□ -1.38
PMS1-203ENST00000409593 PDPK1O15530 556 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 FUCA1P04066 466 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 KRT1P04264 644 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 CYBBP04839 570 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 GLDCP23378 1020 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 HSP90AA2PQ14568 343 aaPredicted RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 NR1I3Q14994 352 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 MTERF2Q49AM1 385 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 ZC3H14Q6PJT7 736 aaKnown RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 PAQR3Q6TCH7 311 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 NLGN2Q8NFZ4 835 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 DIO2Q92813 273 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 CCDC140Q96MF4 163 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 AARSD1Q9BTE6 412 aaKnown RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 FBLN5Q9UBX5 448 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 NPIPB6E9PJ23 425 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 F8W031 263 aaPredicted RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 SRGAP3O43295 1099 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 SCG5P05408 212 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 KCNAB2Q13303 367 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 IQCEQ6IPM2 695 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 ANKLE2Q86XL3 938 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 CCDC103Q8IW40 242 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 LRRC47Q8N1G4 583 aaKnown RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 SREK1Q8WXA9 508 aaKnown RBP6.39□□□□□ -1.39
PMS1-203ENST00000409593 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 KRTAP4-11Q9BYQ6 195 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 SIRPGQ9P1W8 387 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 HCFC2Q9Y5Z7 792 aa6.39□□□□□ -1.39
PMS1-203ENST00000409593 ZC3H12DA2A288 527 aaKnown RBP6.38□□□□□ -1.39
PMS1-203ENST00000409593 MYO1BO43795 1136 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 GLI4P10075 376 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 MAPKAPK2P49137 400 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 ZNF200P98182 395 aaPredicted RBP6.38□□□□□ -1.39
PMS1-203ENST00000409593 WWC2Q6AWC2 1192 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 TEX2Q8IWB9 1127 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 KCTD13Q8WZ19 329 aa6.38□□□□□ -1.39
PMS1-203ENST00000409593 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms