RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RTP1P59025 263 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 ARRDC4Q8NCT1 418 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 RNF41Q9H4P4 317 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 LCTP09848 1927 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 MCM3APO60318 1980 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 CHD7Q9P2D1 2997 aa11.31□□□□□ -0.6
NIF3L1-202ENST00000409020 PCP11498 1178 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 CCDC144BQ3MJ40 725 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SLC39A5Q6ZMH5 540 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 CYB5R4Q7L1T6 521 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 CEP120Q8N960 986 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 TNKSO95271 1327 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 FDX1P10109 184 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 PSEN1P49768 467 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SNX17Q15036 470 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 NSMFQ6X4W1 530 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 MSL3Q8N5Y2 521 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 TTC14Q96N46 770 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 SENP2Q9HC62 589 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
NIF3L1-202ENST00000409020 MUC3AQ02505 3323 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 CTAGE5O15320 804 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 CYP21A2P08686 494 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 STOX1Q6ZVD7 989 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 RNF180Q86T96 592 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 FBXO16Q8IX29 292 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
NIF3L1-202ENST00000409020 REV3LO60673 3130 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 SGSM2O43147 1006 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 ITGB8P26012 769 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 BMP8BP34820 402 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 ACLYP53396 1101 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 KCNA10Q16322 511 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
NIF3L1-202ENST00000409020 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 PYGBP11216 843 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 BEX3Q00994 111 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 TLE2Q04725 743 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 USH1GQ495M9 461 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 CHST3Q7LGC8 479 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 IQCA1Q86XH1 822 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 RAD50Q92878 1312 aa11.27□□□□□ -0.6
NIF3L1-202ENST00000409020 LTBP2Q14767 1821 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 SMPD1P17405 629 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 CALML3P27482 149 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 SEC23AQ15436 765 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 CDC37Q16543 378 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
NIF3L1-202ENST00000409020 ASGR1P07306 291 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 GJA9P57773 515 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 GPATCH4Q5T3I0 446 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms