RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 TOGARAM2Q6ZUX3 1019 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 SRLQ86TD4 932 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 IQUBQ8NA54 791 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 DHX58Q96C10 678 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 CABP5Q9NP86 173 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 NYAP2Q9P242 653 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 V9GY48 417 aaPredicted RBP26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 STK36Q9NRP7 1315 aa26.5■■□□□ 1.83
TRIOBP-203ENST00000403663 CYTH3O43739 400 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 PKN1Q16512 942 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 SHISA4Q96DD7 197 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 MAP3K14Q99558 947 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 EFCC1Q9HA90 598 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 HPSEQ9Y251 543 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 STX10O60499 249 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 MARCKSP29966 332 aaPredicted RBP26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 KIF5BP33176 963 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 ECE1P42892 770 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 TNNT3P45378 269 aaPredicted RBP26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 ACER1Q8TDN7 264 aa26.49■■□□□ 1.83
TRIOBP-203ENST00000403663 RAD21O60216 631 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 ACTN2P35609 894 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 KIF23Q02241 960 aaPredicted RBP26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 PNOCQ13519 176 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 SLC39A14Q15043 492 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 INPP5BP32019 993 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 BRD3Q15059 726 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 TRIM22Q8IYM9 498 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 MKL1Q969V6 931 aa26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 RNF26Q9BY78 433 aaPredicted RBP26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 GLIS2Q9BZE0 524 aaPredicted RBP26.48■■□□□ 1.83
TRIOBP-203ENST00000403663 PITPNM2Q9BZ72 1349 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 KLRF2D3W0D1 207 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 PARP1P09874 1014 aaKnown RBP26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 SNHG28P0DPA3 235 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 TAF1DQ9H5J8 278 aaPredicted RBP26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 WDR90Q96KV7 1748 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 TC2NQ8N9U0 490 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 UBA5Q9GZZ9 404 aa26.47■■□□□ 1.83
TRIOBP-203ENST00000403663 EAPPQ56P03 285 aaPredicted RBP26.46■■□□□ 1.83
TRIOBP-203ENST00000403663 RRP15Q9Y3B9 282 aaKnown RBP26.46■■□□□ 1.83
TRIOBP-203ENST00000403663 PRPF3O43395 683 aaKnown RBP26.45■■□□□ 1.83
TRIOBP-203ENST00000403663 DEXIO95424 95 aa26.45■■□□□ 1.83
TRIOBP-203ENST00000403663 SHC4Q6S5L8 630 aa26.45■■□□□ 1.83
TRIOBP-203ENST00000403663 DCPSQ96C86 337 aaKnown RBP26.45■■□□□ 1.83
TRIOBP-203ENST00000403663 GPCPD1Q9NPB8 672 aa26.45■■□□□ 1.83
TRIOBP-203ENST00000403663 POTEIP0CG38 1075 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 POTEJP0CG39 1038 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 PRKG1Q13976 671 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 KIAA1755Q5JYT7 1200 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 TTBK2Q6IQ55 1244 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 USP50Q70EL3 339 aaPredicted RBP26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 KCTD1Q719H9 257 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 PDILTQ8N807 584 aa26.45■■□□□ 1.82
TRIOBP-203ENST00000403663 NUP88Q99567 741 aaPredicted RBP26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 NOP2P46087 812 aaKnown RBP26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 KRT40Q6A162 431 aa26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 HNRNPLLQ8WVV9 542 aaKnown RBP26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 ZKSCAN4Q969J2 545 aaPredicted RBP26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 KCNJ14Q9UNX9 436 aa26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 DOCK1Q14185 1865 aa26.44■■□□□ 1.82
TRIOBP-203ENST00000403663 ADKP55263 362 aaKnown RBP26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 ZNF543Q08ER8 600 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 KRT26Q7Z3Y9 468 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 SULF1Q8IWU6 871 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 CCDC12Q8WUD4 166 aaPredicted RBP26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 FAM237AA0A1B0GTK4 181 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 F5H6K3 240 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 KLRC3Q07444 240 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 BEND6Q5SZJ8 279 aaPredicted RBP26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 SPICE1Q8N0Z3 855 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 PDE11AQ9HCR9 933 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 VPS54Q9P1Q0 977 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
TRIOBP-203ENST00000403663 AKAP17AQ02040 695 aaKnown RBP26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 SLFN13Q68D06 897 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 WRNIP1Q96S55 665 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 DESI2Q9BSY9 194 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 VAT1LQ9HCJ6 419 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 PPP6R2O75170 966 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 NDUFB10O96000 172 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 ASNSP08243 561 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 BMP6P22004 513 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 SLC16A2P36021 539 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 CHMP4BP1P59074 171 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 KARSQ15046 597 aaKnown RBP26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 ZYXQ15942 572 aaKnown RBP26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 CCDC96Q2M329 555 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 SPECC1LQ69YQ0 1117 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 ZNF341Q9BYN7 854 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 ZSWIM4Q9H7M6 989 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 ANKZF1Q9H8Y5 726 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 VPS18Q9P253 973 aa26.42■■□□□ 1.82
TRIOBP-203ENST00000403663 CUTAO60888 179 aa26.41■■□□□ 1.82
TRIOBP-203ENST00000403663 GNAQP50148 359 aa26.41■■□□□ 1.82
TRIOBP-203ENST00000403663 HSP90AA4PQ58FG1 418 aa26.41■■□□□ 1.82
TRIOBP-203ENST00000403663 DCAF15Q66K64 600 aa26.41■■□□□ 1.82
TRIOBP-203ENST00000403663 SRGAP1Q7Z6B7 1085 aa26.41■■□□□ 1.82
TRIOBP-203ENST00000403663 ASPRV1Q53RT3 343 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 LEKR1Q6ZMV7 388 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms