RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 A0A1W2PQY0 241 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 ERICH2A1L162 156 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 DDAH1O94760 285 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 CALML3P27482 149 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 MCM5P33992 734 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 GJA9P57773 515 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 RTP1P59025 263 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 PWP2Q15269 919 aaKnown RBP17.99■□□□□ 0.47
ATG4B-202ENST00000400771 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 RGS22Q8NE09 1264 aa17.99■□□□□ 0.47
ATG4B-202ENST00000400771 ZBTB5O15062 677 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
ATG4B-202ENST00000400771 SYN1P17600 705 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 RNF180Q86T96 592 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 KCNB2Q92953 911 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 FERMT2Q96AC1 680 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 TMEM87BQ96K49 555 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 PIGSQ96S52 555 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 GDF15Q99988 308 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 LRRC2Q9BYS8 371 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 VAT1LQ9HCJ6 419 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
ATG4B-202ENST00000400771 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
ATG4B-202ENST00000400771 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
ATG4B-202ENST00000400771 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-202ENST00000400771 SMPD1P17405 629 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 LIFRP42702 1097 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 TRIM60Q495X7 471 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 C1orf53Q5VUE5 145 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 EEPD1Q7L9B9 569 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 DNERQ8NFT8 737 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 SYTL5Q8TDW5 730 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-202ENST00000400771 MAF1Q9H063 256 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 TANC1Q9C0D5 1861 aa17.97■□□□□ 0.47
ATG4B-202ENST00000400771 RBM47A0AV96 593 aaKnown RBP17.96■□□□□ 0.47
ATG4B-202ENST00000400771 PLEKHA8P1O95397 391 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 HSD17B4P51659 736 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 ACLYP53396 1101 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 CATIPQ7Z7H3 387 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 TCEANC2Q96MN5 208 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
ATG4B-202ENST00000400771 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
ATG4B-202ENST00000400771 LAMA2P24043 3122 aaKnown RBP17.96■□□□□ 0.47
ATG4B-202ENST00000400771 C6orf222P0C671 652 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-202ENST00000400771 RXRAP19793 462 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
ATG4B-202ENST00000400771 KCNA10Q16322 511 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 TAAR1Q96RJ0 339 aa17.95■□□□□ 0.46
ATG4B-202ENST00000400771 MRPL11Q9Y3B7 192 aaKnown RBP17.95■□□□□ 0.46
ATG4B-202ENST00000400771 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 HSPA4P34932 840 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-202ENST00000400771 FXR1P51114 621 aaKnown RBP eCLIP17.94■□□□□ 0.46
ATG4B-202ENST00000400771 BEX3Q00994 111 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 PDLIM7Q9NR12 457 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 ATP11BQ9Y2G3 1177 aa17.94■□□□□ 0.46
ATG4B-202ENST00000400771 ARIH2O95376 493 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 SLC34A2O95436 690 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 ASGR1P07306 291 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 DUSP28Q4G0W2 176 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 APOA5Q6Q788 366 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
ATG4B-202ENST00000400771 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 FRMPD4Q14CM0 1322 aa17.93■□□□□ 0.46
ATG4B-202ENST00000400771 PNMA6FA0A0J9YX94 578 aa17.92■□□□□ 0.46
ATG4B-202ENST00000400771 IQSEC1Q6DN90 963 aa17.92■□□□□ 0.46
ATG4B-202ENST00000400771 SH3RF1Q7Z6J0 888 aa17.92■□□□□ 0.46
ATG4B-202ENST00000400771 MCF2L2Q86YR7 1114 aa17.92■□□□□ 0.46
ATG4B-202ENST00000400771 CTCFLQ8NI51 663 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-202ENST00000400771 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
ATG4B-202ENST00000400771 NID2Q14112 1375 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 CFBP00751 764 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 CENPBP07199 599 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-202ENST00000400771 CPA1P15085 419 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 BMP8BP34820 402 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 TLE2Q04725 743 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 PDE4DQ08499 809 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 NFXL1Q6ZNB6 911 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
ATG4B-202ENST00000400771 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
ATG4B-202ENST00000400771 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms