RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 NOGQ13253 232 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 CSPP1Q1MSJ5 1256 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 L1TD1Q5T7N2 865 aaKnown RBP7.83□□□□□ -1.16
USP16-203ENST00000399975 TRERF1Q96PN7 1200 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 SPATC1LQ9H0A9 340 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 MROH8Q9H579 483 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 RCOR1Q9UKL0 485 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 ABT1Q9ULW3 272 aaKnown RBP7.83□□□□□ -1.16
USP16-203ENST00000399975 MGAMO43451 1857 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 PFASO15067 1338 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 ALDH1A1P00352 501 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 KRT85P78386 507 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 NR5A1Q13285 461 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 NONOQ15233 471 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP16-203ENST00000399975 DEFB115Q30KQ5 88 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 ABRAQ8N0Z2 381 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 SCAND2PQ9GZW5 306 aaPredicted RBP7.83□□□□□ -1.16
USP16-203ENST00000399975 ACAD9Q9H845 621 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 EHMT1Q9H9B1 1298 aa7.83□□□□□ -1.16
USP16-203ENST00000399975 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.83□□□□□ -1.16
USP16-203ENST00000399975 CIITAP33076 1130 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 MAP2K2P36507 400 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 SREBF1P36956 1147 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 FOSBP53539 338 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 GNL2Q13823 731 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 FAM110CQ1W6H9 321 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 EARS2Q5JPH6 523 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 SNRNP48Q6IEG0 339 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 PPP4R3AQ6IN85 833 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 XRRA1Q6P2D8 792 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 RNF146Q9NTX7 359 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 CCDC194A0A1B0GVG4 234 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 FSD2A1L4K1 749 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 IGF2BP3O00425 579 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP16-203ENST00000399975 LAD1O00515 517 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 EDIL3O43854 480 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 PPP6R2O75170 966 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 BCRP11274 1271 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 GCFC2P16383 781 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 ERVK-9P63128 1117 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 ERVK-24P63145 666 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 PTPAQ15257 358 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 USH1GQ495M9 461 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 ANO1Q5XXA6 986 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 NIPA1Q7RTP0 329 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 FERMT3Q86UX7 667 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 GPRC5AQ8NFJ5 357 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 MOV10L1Q9BXT6 1211 aaKnown RBP7.82□□□□□ -1.16
USP16-203ENST00000399975 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
USP16-203ENST00000399975 PLXNA1Q9UIW2 1896 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 CCNA1P78396 465 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
USP16-203ENST00000399975 SLC39A14Q15043 492 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 ANO3Q9BYT9 981 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 TXNRD2Q9NNW7 524 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 ALAS1P13196 640 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 Q4G0T1 1027 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 TTC38Q5R3I4 469 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 C17orf99Q6UX52 265 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 PIK3AP1Q6ZUJ8 805 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 NEK8Q86SG6 692 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 C4orf32Q8N8J7 132 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 LINC00301Q8NCQ3 95 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 SYTL5Q8TDW5 730 aaPredicted RBP7.81□□□□□ -1.16
USP16-203ENST00000399975 CAPNS2Q96L46 248 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 TMEM260Q9NX78 707 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 CYP39A1Q9NYL5 469 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
USP16-203ENST00000399975 UTRNP46939 3433 aa7.81□□□□□ -1.16
USP16-203ENST00000399975 DNAJC25-GNG10A0A024R161 153 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 NFIBO00712 420 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 CA12O43570 354 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 MCM4P33991 863 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 PRPHP41219 470 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 UBE2SQ16763 222 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 CPXCR1Q8N123 301 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 KCNG4Q8TDN1 519 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 LEO1Q8WVC0 666 aaPredicted RBP7.8□□□□□ -1.16
USP16-203ENST00000399975 USP28Q96RU2 1077 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 ZFYVE28Q9HCC9 887 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 SPDYE3A6NKU9 549 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 DDX11L8A8MPP1 907 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 STRNO43815 780 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 TLR2O60603 784 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 STAM2O75886 525 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 CYP2C8P10632 490 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 MAPK4P31152 587 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 ATP2C1P98194 919 aaPredicted RBP7.8□□□□□ -1.16
USP16-203ENST00000399975 Q3C1V9 767 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
USP16-203ENST00000399975 JAKMIP3Q5VZ66 844 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 PCNX4Q63HM2 1172 aa7.8□□□□□ -1.16
USP16-203ENST00000399975 ARL6IP4Q66PJ3 421 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms