RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 FAM102BQ5T8I3 360 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 CEP128Q6ZU80 1094 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ENAHQ8N8S7 591 aaPredicted RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 U2AF1L4Q8WU68 220 aaKnown RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 WDR11Q9BZH6 1224 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 PNPLA7Q6ZV29 1317 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 TCP1P17987 556 aaKnown RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 BRD3Q15059 726 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ERCC6LQ2NKX8 1250 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 MAK16Q9BXY0 300 aaKnown RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 GINS2Q9Y248 185 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 KCNQ2O43526 872 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 SLC8A3P57103 927 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 CPLX4Q7Z7G2 160 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 RWDD2AQ9UIY3 292 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 HYOU1Q9Y4L1 999 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 PNMA6FA0A0J9YX94 578 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 EFCAB8A8MWE9 144 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 CSF1RP07333 972 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 DAAM2Q86T65 1068 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 SREK1Q8WXA9 508 aaKnown RBP15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 GJA10Q969M2 543 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 PAGE5Q96GU1 130 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 AMFRQ9UKV5 643 aa15.67■□□□□ 0.1
PCDHGA11-201ENST00000398587 CCNE1P24864 410 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 AGTPBP1Q9UPW5 1226 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 UTYO14607 1347 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 CD19P15391 556 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 DCUN1D2Q6PH85 259 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 AFAP1L1Q8TED9 768 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 ATP2C2O75185 946 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 H2AFZP0C0S5 128 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 SNX16P57768 344 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 H2AFVQ71UI9 128 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 GAP43P17677 238 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 EXOSC10Q01780 885 aaKnown RBP15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 MAN2A1Q16706 1144 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 EXOC3L4Q17RC7 722 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 SYDE2Q5VT97 1194 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 STOX1Q6ZVD7 989 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 ANKRD35Q8N283 1001 aa15.66■□□□□ 0.1
PCDHGA11-201ENST00000398587 A6NNZ2 444 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 TUBB8Q3ZCM7 444 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 ZNF34Q8IZ26 560 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 MLXIPQ9HAP2 919 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 SAMSN1Q9NSI8 373 aaKnown RBP15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 FAM184BQ9ULE4 1060 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 STAMBPO95630 424 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 PLCG1P19174 1290 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 NR2F2P24468 414 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 STAT2P52630 851 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 SEPT2Q15019 361 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 PDIA6Q15084 440 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 ARMCX5Q6P1M9 558 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 CROCCP2Q86T23 111 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 VSTM4Q8IW00 320 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 PPP1R13BQ96KQ4 1090 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 GOLGA6BA6NDN3 693 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 SARM1Q6SZW1 724 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 RUFY4Q6ZNE9 571 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 TRIM31Q9BZY9 425 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 SPATA31D1Q6ZQQ2 1576 aa15.65■□□□□ 0.1
PCDHGA11-201ENST00000398587 IGSF3O75054 1194 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 RAD17O75943 681 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 CDC27P30260 824 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 PODNQ7Z5L7 613 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 TSC1Q92574 1164 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 DISC1Q9NRI5 854 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 LIG4P49917 911 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 FMR1NBQ8N0W7 255 aaPredicted RBP15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 TRIM6Q9C030 488 aaPredicted RBP15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 MYO1AQ9UBC5 1043 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 AFF2P51816 1311 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 CD163L1Q9NR16 1453 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 COBLO75128 1261 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 ATP5DP30049 168 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 COMMD10Q9Y6G5 202 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 USP14P54578 494 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 PSMD2Q13200 908 aa15.64■□□□□ 0.09
PCDHGA11-201ENST00000398587 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms