RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CCSAPQ6IQ19 270 aaPredicted RBP19.41■□□□□ 0.7
APTR-201ENST00000398043 KLHDC9Q8NEP7 349 aa19.41■□□□□ 0.7
APTR-201ENST00000398043 DNERQ8NFT8 737 aa19.41■□□□□ 0.7
APTR-201ENST00000398043 TCEANC2Q96MN5 208 aa19.41■□□□□ 0.7
APTR-201ENST00000398043 UPF3AQ9H1J1 476 aaKnown RBP19.41■□□□□ 0.7
APTR-201ENST00000398043 COL20A1Q9P218 1284 aa19.41■□□□□ 0.7
APTR-201ENST00000398043 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
APTR-201ENST00000398043 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
APTR-201ENST00000398043 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
APTR-201ENST00000398043 PNMA6FA0A0J9YX94 578 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.4■□□□□ 0.7
APTR-201ENST00000398043 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 CTAGE5O15320 804 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 HSD17B4P51659 736 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 LRRC26Q2I0M4 334 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 SRBD1Q8N5C6 995 aaKnown RBP19.4■□□□□ 0.7
APTR-201ENST00000398043 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
APTR-201ENST00000398043 USP26Q9BXU7 913 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 SENP6Q9GZR1 1112 aaPredicted RBP19.4■□□□□ 0.7
APTR-201ENST00000398043 PDGFCQ9NRA1 345 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 BRPF3Q9ULD4 1205 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 PHF24Q9UPV7 400 aa19.4■□□□□ 0.7
APTR-201ENST00000398043 GNEQ9Y223 722 aaKnown RBP19.4■□□□□ 0.7
APTR-201ENST00000398043 EVI5O60447 810 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 PLEKHA8P1O95397 391 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 CALM1P0DP23 149 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 CALM2P0DP24 149 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 CALM3P0DP25 149 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 RXRAP19793 462 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 CST5P28325 142 aaPredicted RBP19.39■□□□□ 0.69
APTR-201ENST00000398043 KIF5BP33176 963 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 IRX5P78411 483 aaPredicted RBP19.39■□□□□ 0.69
APTR-201ENST00000398043 APOA5Q6Q788 366 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 NFXL1Q6ZNB6 911 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.69
APTR-201ENST00000398043 VTA1Q9NP79 307 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 PCDHA1Q9Y5I3 950 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 LTBP2Q14767 1821 aa19.39■□□□□ 0.69
APTR-201ENST00000398043 RBM47A0AV96 593 aaKnown RBP19.38■□□□□ 0.69
APTR-201ENST00000398043 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 KBTBD13C9JR72 458 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
APTR-201ENST00000398043 CPA1P15085 419 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 GJA9P57773 515 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 SNX17Q15036 470 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 TMEM63BQ5T3F8 832 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 HOMER1Q86YM7 354 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 FBXO16Q8IX29 292 aaPredicted RBP19.38■□□□□ 0.69
APTR-201ENST00000398043 FBXL16Q8N461 479 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 TAAR1Q96RJ0 339 aa19.38■□□□□ 0.69
APTR-201ENST00000398043 TRIOBPQ9H2D6 2365 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 SMPD1P17405 629 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 IQSEC1Q6DN90 963 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 EEPD1Q7L9B9 569 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 RNF180Q86T96 592 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 RAB11FIP4Q86YS3 637 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 SAMD3Q8N6K7 520 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 TSEN34Q9BSV6 310 aaKnown RBP19.37■□□□□ 0.69
APTR-201ENST00000398043 AGXT2Q9BYV1 514 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
APTR-201ENST00000398043 NR2E3Q9Y5X4 410 aa19.37■□□□□ 0.69
APTR-201ENST00000398043 PTGS1P23219 599 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 GNAQP50148 359 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 TNFAIP2Q03169 654 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 FUT2Q10981 343 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 C1orf53Q5VUE5 145 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 SLC39A5Q6ZMH5 540 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 TMTC3Q6ZXV5 915 aa19.36■□□□□ 0.69
APTR-201ENST00000398043 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
APTR-201ENST00000398043 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
APTR-201ENST00000398043 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
APTR-201ENST00000398043 CFBP00751 764 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 TRAF1Q13077 416 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 KCNA10Q16322 511 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 C7orf61Q8IZ16 206 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 PRO3102Q9H379 93 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 Q9Y3F1 56 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 SCN10AQ9Y5Y9 1956 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 DOCK5Q9H7D0 1870 aa19.35■□□□□ 0.69
APTR-201ENST00000398043 A0A1W2PQ45 241 aaPredicted RBP19.34■□□□□ 0.69
APTR-201ENST00000398043 A0A1W2PQY0 241 aa19.34■□□□□ 0.69
APTR-201ENST00000398043 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
APTR-201ENST00000398043 ACLYP53396 1101 aa19.34■□□□□ 0.69
APTR-201ENST00000398043 RCAN1P53805 252 aa19.34■□□□□ 0.69
APTR-201ENST00000398043 NSUN6Q8TEA1 469 aaKnown RBP19.34■□□□□ 0.69
APTR-201ENST00000398043 FERMT2Q96AC1 680 aa19.34■□□□□ 0.69
APTR-201ENST00000398043 RRP36Q96EU6 259 aaKnown RBP19.34■□□□□ 0.69
APTR-201ENST00000398043 IWS1Q96ST2 819 aa19.34■□□□□ 0.69
APTR-201ENST00000398043 RANBP2P49792 3224 aaKnown RBP19.34■□□□□ 0.69
APTR-201ENST00000398043 MOXD2PA6NHM9 499 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 RPS6KB1P23443 525 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 ATN1P54259 1190 aaPredicted RBP19.33■□□□□ 0.68
APTR-201ENST00000398043 PDE4DQ08499 809 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 DUSP28Q4G0W2 176 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms