RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PLA2G6O60733 806 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 RAB11FIP3O75154 756 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 TTLL1O95922 423 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 ZNF444Q8N0Y2 327 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-202ENST00000396629 STK11IPQ8N1F8 1099 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 STAG1Q8WVM7 1258 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 PLIN4Q96Q06 1357 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-202ENST00000396629 RBM47A0AV96 593 aaKnown RBP10.06□□□□□ -0.8
SCFD1-202ENST00000396629 MINDY4BA8MYZ0 360 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 BAIAP3O94812 1187 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 STAT2P52630 851 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 LRRC47Q8N1G4 583 aaKnown RBP10.06□□□□□ -0.8
SCFD1-202ENST00000396629 GMCL1Q96IK5 515 aa10.06□□□□□ -0.8
SCFD1-202ENST00000396629 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-202ENST00000396629 ALAS1P13196 640 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-202ENST00000396629 NBPF20Q3BBV1 942 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 MUM1L1Q5H9M0 696 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 FTOQ9C0B1 505 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCFD1-202ENST00000396629 ZNF287Q9HBT7 754 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 BRWD1Q9NSI6 2320 aa10.05□□□□□ -0.8
SCFD1-202ENST00000396629 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 MYL3P08590 195 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 CPT1AP50416 773 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
SCFD1-202ENST00000396629 LEXMQ3ZCV2 418 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 UBE2ZQ9H832 354 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-202ENST00000396629 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-202ENST00000396629 PRDM1O75626 825 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 BFSP2Q13515 415 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 GJD3Q8N144 294 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
SCFD1-202ENST00000396629 WDR11Q9BZH6 1224 aa10.04□□□□□ -0.8
SCFD1-202ENST00000396629 LCHNA4D1U4 455 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 KPNA6O60684 536 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 HMMRO75330 724 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 MRE11P49959 708 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 ERVK-21P61565 698 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 WDR5P61964 334 aaKnown RBP10.03□□□□□ -0.8
SCFD1-202ENST00000396629 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
SCFD1-202ENST00000396629 FAM47CQ5HY64 1035 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 RCSD1Q6JBY9 416 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 OR6J1Q8NGC5 347 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-202ENST00000396629 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 OSBP2Q969R2 916 aa10.03□□□□□ -0.8
SCFD1-202ENST00000396629 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-202ENST00000396629 NKRFO15226 690 aaKnown RBP eCLIP10.02□□□□□ -0.8
SCFD1-202ENST00000396629 SLC1A4P43007 532 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 KCNJ6P48051 423 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 ALDH5A1P51649 535 aaPredicted RBP10.02□□□□□ -0.8
SCFD1-202ENST00000396629 GPNMBQ14956 572 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 NSMFQ6X4W1 530 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 PANK1Q8TE04 598 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 KCNH6Q9H252 994 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 SUGCTQ9HAC7 445 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 ADD3Q9UEY8 706 aaKnown RBP10.02□□□□□ -0.8
SCFD1-202ENST00000396629 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.8
SCFD1-202ENST00000396629 A6NJR5 290 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 ALADP13716 330 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 GNAT2P19087 354 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 MCCP23508 829 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 SNAP25P60880 206 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-202ENST00000396629 BRDTQ58F21 947 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-202ENST00000396629 APPBP2Q92624 585 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 TGS1Q96RS0 853 aaKnown RBP10.02□□□□□ -0.81
SCFD1-202ENST00000396629 BCL11AQ9H165 835 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.81
SCFD1-202ENST00000396629 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
SCFD1-202ENST00000396629 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 ICAM1P05362 532 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 TDO2P48775 406 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 TFAP4Q01664 338 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 NHLH1Q02575 133 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 BAATQ14032 418 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-202ENST00000396629 KCTD1Q719H9 257 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 CAGE1Q8TC20 777 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 AFAP1L1Q8TED9 768 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 PPP1R13LQ8WUF5 828 aa10.01□□□□□ -0.81
SCFD1-202ENST00000396629 RAD9AQ99638 391 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms