RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 MYO9BQ13459 2157 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 RBM47A0AV96 593 aaKnown RBP20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 FGRP09769 529 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 ACTN1P12814 892 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 ATP2A2P16615 1042 aaKnown RBP20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 ALX1Q15699 326 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 PPP2R2DQ66LE6 453 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 EEPD1Q7L9B9 569 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 MAF1Q9H063 256 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 WNT8AQ9H1J5 351 aa20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 YBX2Q9Y2T7 364 aaKnown RBP20.66■□□□□ 0.9
EXOSC3-202ENST00000396521 UMODL1Q5DID0 1318 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 MX1P20591 662 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 BAATQ14032 418 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 PHOSPHO2Q8TCD6 241 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 ADAMTS19Q8TE59 1207 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 TCP11L1Q9NUJ3 509 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 ZBTB47Q9UFB7 747 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 MCM3APO60318 1980 aa20.65■□□□□ 0.9
EXOSC3-202ENST00000396521 TNKSO95271 1327 aa20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 PCP11498 1178 aaKnown RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 POU3F3P20264 500 aaPredicted RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 ALDH5A1P51649 535 aaPredicted RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 PSMC6P62333 389 aa20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 PURAQ00577 322 aaKnown RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 PTPN11Q06124 597 aaPredicted RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 SYDE2Q5VT97 1194 aa20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 DNERQ8NFT8 737 aa20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 UHRF1Q96T88 793 aaPredicted RBP20.64■□□□□ 0.89
EXOSC3-202ENST00000396521 ZBBXA8MT70 800 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 PITPNM1O00562 1244 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 CTDSPL2Q05D32 466 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 CCDC85BQ15834 202 aaPredicted RBP20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 TMEM67Q5HYA8 995 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 NFRKBQ6P4R8 1299 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 TTC14Q96N46 770 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 HELLSQ9NRZ9 838 aa20.63■□□□□ 0.89
EXOSC3-202ENST00000396521 PTPDC1A2A3K4 754 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 GTPBP6O43824 516 aaPredicted RBP20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 NMT2O60551 498 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 COL9A1P20849 921 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 NT5C2P49902 561 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 SNAP25P60880 206 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 RETREG2Q8NC44 543 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 SLC9A7Q96T83 725 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 BDP1A6H8Y1 2624 aa20.62■□□□□ 0.89
EXOSC3-202ENST00000396521 WDR19Q8NEZ3 1342 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 A6NJR5 290 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 KIF28PB7ZC32 967 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 FOXP2O15409 715 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 PDE4DQ08499 809 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 BFSP2Q13515 415 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 PPP2R5BQ15173 497 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 RNF207Q6ZRF8 634 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 RGS22Q8NE09 1264 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 OR6J1Q8NGC5 347 aa20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 TRMT13Q9NUP7 481 aaKnown RBP20.61■□□□□ 0.89
EXOSC3-202ENST00000396521 NFIBO00712 420 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 MYL3P08590 195 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 RABGGTBP53611 331 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 CHMP4CQ96CF2 233 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 SCLYQ96I15 445 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 TMEM47Q9BQJ4 181 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 TOMM22Q9NS69 142 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 CHD7Q9P2D1 2997 aa20.6■□□□□ 0.89
EXOSC3-202ENST00000396521 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 CYP2C9P11712 490 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 EDNRBP24530 442 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 SLC16A2P36021 539 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 NBPF20Q3BBV1 942 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 TMEM63BQ5T3F8 832 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 TTBK2Q6IQ55 1244 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 VWCEQ96DN2 955 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 INCENPQ9NQS7 918 aa20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
EXOSC3-202ENST00000396521 BAIAP3O94812 1187 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 PARNO95453 639 aaKnown RBP20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 FGAP02671 866 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 CALML3P27482 149 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 RPS6P62753 249 aaKnown RBP20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 TTLL4Q14679 1199 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 FAM47CQ5HY64 1035 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 GPATCH4Q5T3I0 446 aaKnown RBP20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 CCDC155Q8N6L0 562 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 PURBQ96QR8 312 aaKnown RBP20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 C1QTNF1Q9BXJ1 281 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 COG5Q9UP83 839 aa20.58■□□□□ 0.89
EXOSC3-202ENST00000396521 IQCF3P0C7M6 154 aa20.57■□□□□ 0.88
EXOSC3-202ENST00000396521 PDHBP11177 359 aa20.57■□□□□ 0.88
EXOSC3-202ENST00000396521 PTGS1P23219 599 aa20.57■□□□□ 0.88
EXOSC3-202ENST00000396521 MCMDC2Q4G0Z9 681 aa20.57■□□□□ 0.88
EXOSC3-202ENST00000396521 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
EXOSC3-202ENST00000396521 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms