RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CTDNEP1O95476 244 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 TIMM10P62072 90 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 RESTQ13127 1097 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 ZC3H18Q86VM9 953 aaKnown RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 LCA5Q86VQ0 697 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 KCNK9Q9NPC2 374 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 HDAC6Q9UBN7 1215 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 ABT1Q9ULW3 272 aaKnown RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 RPS6KL1Q9Y6S9 549 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 TMEM232C9JQI7 657 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 NR1D1P20393 614 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 SERPINB4P48594 390 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 APBA1Q02410 837 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 RFX7Q2KHR2 1363 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 LRRC24Q50LG9 513 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 SLC44A4Q53GD3 710 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 TMTC2Q8N394 836 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 KIF2BQ8N4N8 673 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 RAB3IL1Q8TBN0 382 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 IFT74Q96LB3 600 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 NLRP3Q96P20 1036 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.924e-7■■□□□ 12
NDE1-202ENST00000396355 ACTR5Q9H9F9 607 aaPredicted RBP9.28□□□□□ -0.92
NDE1-202ENST00000396355 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 TOGARAM1Q9Y4F4 1720 aa9.28□□□□□ -0.92
NDE1-202ENST00000396355 GCOM1H8Y6P7 765 aaPredicted RBP9.27□□□□□ -0.92
NDE1-202ENST00000396355 MYZAPP0CAP1 466 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 ADRA2BP18089 450 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 AFMP43652 599 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 MAP3K9P80192 1104 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 C2orf54Q08AI8 447 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 PTPROQ16827 1216 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 NLRP14Q86W24 1093 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 CCDC82Q8N4S0 544 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 IQUBQ8NA54 791 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 KBTBD3Q8NAB2 608 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 SETDB2Q96T68 719 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 CEP131Q9UPN4 1083 aa9.27□□□□□ -0.92
NDE1-202ENST00000396355 SH3TC1Q8TE82 1336 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 ERVV-2B6SEH9 535 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 USO1O60763 962 aaKnown RBP9.27□□□□□ -0.93
NDE1-202ENST00000396355 CXCR5P32302 372 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 ADD1P35611 737 aaKnown RBP9.27□□□□□ -0.93
NDE1-202ENST00000396355 MPP3Q13368 585 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 RBM43Q6ZSC3 357 aaKnown RBP9.27□□□□□ -0.93
NDE1-202ENST00000396355 ZNF473Q8WTR7 871 aaKnown RBP9.27□□□□□ -0.93
NDE1-202ENST00000396355 TAF4BQ92750 862 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 L1RE1Q9UN81 338 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 NFE2L3Q9Y4A8 694 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 NRAPQ86VF7 1730 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 FOXP2O15409 715 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 C21orf2O43822 256 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 COBLO75128 1261 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 KRT14P02533 472 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 FERP16591 822 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.93
NDE1-202ENST00000396355 SMTNP53814 917 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 KLHL7Q8IXQ5 586 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 GSDMBQ8TAX9 411 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 UTRNP46939 3433 aa9.27□□□□□ -0.93
NDE1-202ENST00000396355 H7C1W4 665 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 DNAJC6O75061 913 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 SERPINB2P05120 415 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 CDC25BP30305 580 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 GJA8P48165 433 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 TUFMP49411 452 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 DYNC1I2Q13409 638 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 TRIM50Q86XT4 487 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 VPS16Q9H269 839 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 UNC45AQ9H3U1 944 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 STIM2Q9P246 746 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 TUBB4BP68371 445 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 RASSF7Q02833 373 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 CUL5Q93034 780 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 HOOK2Q96ED9 719 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 EPAS1Q99814 870 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 PUS3Q9BZE2 481 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 GALNT8Q9NY28 637 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 MAGEC2Q9UBF1 373 aaPredicted RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 IQSEC3Q9UPP2 1182 aaPredicted RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 C2CD2Q9Y426 696 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 MYO5AQ9Y4I1 1855 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 M0R2C6 588 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 XBP1P17861 261 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 CHST3Q7LGC8 479 aa9.26□□□□□ -0.93
NDE1-202ENST00000396355 NSUN7Q8NE18 718 aaKnown RBP9.26□□□□□ -0.93
NDE1-202ENST00000396355 JDP2Q8WYK2 163 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms