RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 CAPN11Q9UMQ6 739 aa10.34□□□□□ -0.75
CDRT1-203ENST00000395667 ESYT2A0FGR8 921 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 PPP1R2P41236 205 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 ATP2B2Q01814 1243 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 ASPRV1Q53RT3 343 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 CLEC10AQ8IUN9 316 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 HPS3Q969F9 1004 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.75
CDRT1-203ENST00000395667 DNAJC7Q99615 494 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 NOC4LQ9BVI4 516 aaKnown RBP10.33□□□□□ -0.75
CDRT1-203ENST00000395667 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.75
CDRT1-203ENST00000395667 hCG_1984214I3L0E3 225 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 ATP8B1O43520 1251 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
CDRT1-203ENST00000395667 SRGNP10124 158 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 AKR1B1P15121 316 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 TNNI2P48788 182 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 KIAA1328Q86T90 577 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 ZNF713Q8N859 430 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-203ENST00000395667 RAB34Q9BZG1 259 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 SLC39A2Q9NP94 309 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 LY75O60449 1722 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 CTAGE15A4D2H0 777 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 CTAGE8P0CG41 777 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 ORC2Q13416 577 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-203ENST00000395667 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 CTAGE6Q86UF2 777 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 CTAGE4Q8IX94 777 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 MMTAG2Q9BU76 263 aaKnown RBP10.33□□□□□ -0.76
CDRT1-203ENST00000395667 NUP58Q9BVL2 599 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 TRIM10Q9UDY6 481 aa10.33□□□□□ -0.76
CDRT1-203ENST00000395667 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 MARCH6O60337 910 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 TDP2O95551 362 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 TFRCP02786 760 aaKnown RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 MCM6Q14566 821 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 CCDC122Q5T0U0 273 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 AGPAT5Q9NUQ2 364 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 CCDC151A5D8V7 595 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 SLC37A4O43826 429 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 SASH3O75995 380 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 IDEP14735 1019 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 CYLC1P35663 651 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 KLK7P49862 253 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 KRT83P78385 493 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 BRD3Q15059 726 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 WHAMMP3Q1A5X7 153 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 CCDC96Q2M329 555 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 KRT79Q5XKE5 535 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 LARP4BQ92615 738 aaKnown RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 CRAMP1Q96RY5 1269 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 HAUS4Q9H6D7 363 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 MYO6Q9UM54 1294 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
CDRT1-203ENST00000395667 REXO2Q9Y3B8 237 aaKnown RBP10.32□□□□□ -0.76
CDRT1-203ENST00000395667 POTEMA6NI47 508 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 RAD21O60216 631 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 TTLL1O95922 423 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
CDRT1-203ENST00000395667 DDR1Q08345 913 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 GRB10Q13322 594 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 LONRF2Q1L5Z9 754 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 WDR59Q6PJI9 974 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 SEPT12Q8IYM1 358 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 RETREG2Q8NC44 543 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 KIAA0895Q8NCT3 520 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 SNX29Q8TEQ0 813 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 MTMR9Q96QG7 549 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
CDRT1-203ENST00000395667 USP40Q9NVE5 1235 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 MYMKA6NI61 221 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 G3V3G9 751 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 NOVP48745 357 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDRT1-203ENST00000395667 SCNN1DP51172 638 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 TUBB4BP68371 445 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 ZBED6P86452 979 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 UBE2SQ16763 222 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 COA1Q9GZY4 146 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
CDRT1-203ENST00000395667 TFR2Q9UP52 801 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 PNMA6FA0A0J9YX94 578 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 ERLIN1O75477 346 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 GABPAQ06546 454 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 UNC13DQ70J99 1090 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 ADGRF4Q8IZF3 695 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 JAKMIP2Q96AA8 810 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
CDRT1-203ENST00000395667 BLOC1S4Q9NUP1 217 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms