RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 RSPH14Q9UHP6 348 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
ACTN1-203ENST00000394419 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 C2orf54Q08AI8 447 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 GRM4Q14833 912 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TSG101Q99816 390 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 H3BQF6 201 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TACC1O75410 805 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TDP2O95551 362 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 PLEKP08567 350 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-203ENST00000394419 MAP9Q49MG5 647 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TCERG1LQ5VWI1 586 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 LACRTQ9GZZ8 138 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 ANKZF1Q9H8Y5 726 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 MYH7P12883 1935 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 STXBP3O00186 592 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 CCNE1P24864 410 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TCP10Q12799 353 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 MEX3CQ5U5Q3 659 aaKnown RBP11.74□□□□□ -0.53
ACTN1-203ENST00000394419 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
ACTN1-203ENST00000394419 RASA1P20936 1047 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 CYP2C19P33261 490 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 PAFAH1B1P43034 410 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 MAGEA1P43355 309 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 NAALADL2Q58DX5 795 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 MOCS3O95396 460 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 ADCY7P51828 1080 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 RIN2Q8WYP3 895 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-203ENST00000394419 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 SMARCAL1Q9NZC9 954 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-203ENST00000394419 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 CKAP4Q07065 602 aaKnown RBP11.73□□□□□ -0.53
ACTN1-203ENST00000394419 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 IRF2BP1Q8IU81 584 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 DHTKD1Q96HY7 919 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-203ENST00000394419 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 MYH15Q9Y2K3 1946 aa11.73□□□□□ -0.53
ACTN1-203ENST00000394419 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-203ENST00000394419 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 PBX1P40424 430 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 IFT81Q8WYA0 676 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 SLURP2P0DP57 97 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 EIF4A3P38919 411 aaKnown RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 NOP2P46087 812 aaKnown RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 RASSF7Q02833 373 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 NUP58Q9BVL2 599 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 CD209Q9NNX6 404 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 ARHGAP25P42331 645 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 ZBED6P86452 979 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 TUBB2AQ13885 445 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 BEND6Q5SZJ8 279 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.535e-7■□□□□ 8.3
ACTN1-203ENST00000394419 GIMAP8Q8ND71 665 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-203ENST00000394419 TUBB2BQ9BVA1 445 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 CAPN11Q9UMQ6 739 aa11.72□□□□□ -0.53
ACTN1-203ENST00000394419 SNAP25P60880 206 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 GPSM2P81274 684 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 GRAPQ13588 217 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-203ENST00000394419 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
ACTN1-203ENST00000394419 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
ACTN1-203ENST00000394419 NCK2O43639 380 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 RHOBTB3O94955 611 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 CACNB3P54284 484 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 TTC19Q6DKK2 380 aaPredicted RBP11.71□□□□□ -0.54
ACTN1-203ENST00000394419 TTI2Q6NXR4 508 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 SLF2Q8IX21 1173 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.54
ACTN1-203ENST00000394419 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 NUP98P52948 1817 aa11.71□□□□□ -0.54
ACTN1-203ENST00000394419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
ACTN1-203ENST00000394419 ZNF76P36508 570 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 DDX12PQ92771 950 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 CCSER1Q9C0I3 900 aa11.7□□□□□ -0.54
ACTN1-203ENST00000394419 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms