RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CUEDC2Q9H467 287 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 LMNB1P20700 586 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 CASP1P29466 404 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 TXKP42681 527 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 TMEM266Q2M3C6 531 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 NAALADL2Q58DX5 795 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 ARHGAP27Q6ZUM4 889 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 FAM160B2Q86V87 743 aa25.05■■□□□ 1.6
HMGA2-203ENST00000393578 DDX25Q9UHL0 483 aaKnown RBP25.05■■□□□ 1.6
HMGA2-203ENST00000393578 ATAD5Q96QE3 1844 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 CTNND1O60716 968 aaKnown RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 PDIA5Q14554 519 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 STAMQ92783 540 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 ANO3Q9BYT9 981 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 GLIS2Q9BZE0 524 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 RAB34Q9BZG1 259 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 HSD3B7Q9H2F3 369 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 MAGEF1Q9HAY2 307 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 MYH7BA7E2Y1 1941 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 DICER1Q9UPY3 1922 aaKnown RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 FOSP01100 380 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 MYL1P05976 194 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 ERCC5P28715 1186 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 ZYXQ15942 572 aaKnown RBP25.04■■□□□ 1.6
HMGA2-203ENST00000393578 GPC2Q8N158 579 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 FEM1BQ9UK73 627 aa25.04■■□□□ 1.6
HMGA2-203ENST00000393578 ZNF341Q9BYN7 854 aa25.03■■□□□ 1.6
HMGA2-203ENST00000393578 RANBP17Q9H2T7 1088 aaKnown RBP25.03■■□□□ 1.6
HMGA2-203ENST00000393578 GPRC5DQ9NZD1 345 aa25.03■■□□□ 1.6
HMGA2-203ENST00000393578 LMOD1P29536 600 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-203ENST00000393578 CUL4BQ13620 913 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 APOBEC3FQ8IUX4 373 aaKnown RBP25.02■■□□□ 1.6
HMGA2-203ENST00000393578 ENOX1Q8TC92 643 aaKnown RBP25.02■■□□□ 1.6
HMGA2-203ENST00000393578 FEZ1Q99689 392 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 BLZF1Q9H2G9 400 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 KBTBD4Q9NVX7 518 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 LRWD1Q9UFC0 647 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 CYP3A7-CYP3A51PA0A087WV96 503 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 CYP3A7P24462 503 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 MOXD1Q6UVY6 613 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 CRYGNQ8WXF5 182 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 KIFC2Q96AC6 838 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 HOOK2Q96ED9 719 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 RMND1Q9NWS8 449 aa25.02■■□□□ 1.6
HMGA2-203ENST00000393578 PIK3CDO00329 1044 aa25.01■■□□□ 1.59
HMGA2-203ENST00000393578 OPLAHO14841 1288 aa25.01■■□□□ 1.59
HMGA2-203ENST00000393578 PLCG1P19174 1290 aa25.01■■□□□ 1.59
HMGA2-203ENST00000393578 NBPF12Q5TAG4 269 aaPredicted RBP25.01■■□□□ 1.59
HMGA2-203ENST00000393578 DCAF15Q66K64 600 aa25.01■■□□□ 1.59
HMGA2-203ENST00000393578 CCDC84Q86UT8 332 aaPredicted RBP25.01■■□□□ 1.59
HMGA2-203ENST00000393578 MMTAG2Q9BU76 263 aaKnown RBP25.01■■□□□ 1.59
HMGA2-203ENST00000393578 TTC12Q9H892 705 aaPredicted RBP25.01■■□□□ 1.59
HMGA2-203ENST00000393578 SPDYE3A6NKU9 549 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 ZNF500O60304 480 aaPredicted RBP25■■□□□ 1.59
HMGA2-203ENST00000393578 LPAR1Q92633 364 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 CALML4Q96GE6 196 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 MBOAT7Q96N66 472 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 ZNF830Q96NB3 372 aaPredicted RBP25■■□□□ 1.59
HMGA2-203ENST00000393578 KIAA1683Q9H0B3 1180 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 FMR1Q06787 632 aaKnown RBP eCLIP25■■□□□ 1.59
HMGA2-203ENST00000393578 ANGEL2Q5VTE6 544 aaKnown RBP25■■□□□ 1.59
HMGA2-203ENST00000393578 HAS1Q92839 578 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 FHDC1Q9C0D6 1143 aaPredicted RBP25■■□□□ 1.59
HMGA2-203ENST00000393578 FANCLQ9NW38 375 aa25■■□□□ 1.59
HMGA2-203ENST00000393578 SBF1O95248 1867 aa24.99■■□□□ 1.59
HMGA2-203ENST00000393578 RPN1P04843 607 aaKnown RBP24.99■■□□□ 1.59
HMGA2-203ENST00000393578 ARHGAP4P98171 946 aa24.99■■□□□ 1.59
HMGA2-203ENST00000393578 SEMA3FQ13275 785 aa24.99■■□□□ 1.59
HMGA2-203ENST00000393578 PLIN2Q99541 437 aa24.99■■□□□ 1.59
HMGA2-203ENST00000393578 P2RX7Q99572 595 aaKnown RBP24.99■■□□□ 1.59
HMGA2-203ENST00000393578 IFNKQ9P0W0 207 aa24.99■■□□□ 1.59
HMGA2-203ENST00000393578 SREBF1P36956 1147 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 FANCCQ00597 558 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 CCDC186Q7Z3E2 898 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 WDR46O15213 610 aaKnown RBP24.98■■□□□ 1.59
HMGA2-203ENST00000393578 ATP1A3P13637 1013 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 TRPM4Q8TD43 1214 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 LRRC15Q8TF66 581 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 XPO4Q9C0E2 1151 aaKnown RBP24.98■■□□□ 1.59
HMGA2-203ENST00000393578 NRBP1Q9UHY1 535 aa24.98■■□□□ 1.59
HMGA2-203ENST00000393578 MARCH6O60337 910 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 PTGS1P23219 599 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 CCDC174Q6PII3 467 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 KCNMB3Q9NPA1 279 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 FBXO28Q9NVF7 368 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 ZNF112Q9UJU3 913 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 PCDHA12Q9UN75 941 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 NFE2L3Q9Y4A8 694 aa24.97■■□□□ 1.59
HMGA2-203ENST00000393578 PPP1R3GB7ZBB8 358 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 CD44P16070 742 aaKnown RBP24.96■■□□□ 1.59
HMGA2-203ENST00000393578 TAL1P17542 331 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-203ENST00000393578 ZNF658Q5TYW1 1059 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-203ENST00000393578 MED15Q96RN5 788 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 MRPL11Q9Y3B7 192 aaKnown RBP24.96■■□□□ 1.59
HMGA2-203ENST00000393578 POTEMA6NI47 508 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 INPP5BP32019 993 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 KCNB1Q14721 858 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 KRT79Q5XKE5 535 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 KCNF1Q9H3M0 494 aa24.96■■□□□ 1.59
HMGA2-203ENST00000393578 STK17AQ9UEE5 414 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms