RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 A0A1W2PQ45 241 aaPredicted RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 A0A1W2PQY0 241 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 VCAM1P19320 739 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 ERCC3P19447 782 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 RRP1BQ14684 758 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 FAM47AQ5JRC9 791 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 CCDC158Q5M9N0 1113 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 PRAMEF19Q5SWL8 479 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 TMEM164Q5U3C3 297 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 RPUSD2Q8IZ73 545 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.56□□□□□ -0.88
CASP4-201ENST00000393150 SH2D4AQ9H788 454 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 TOR4AQ9NXH8 423 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 USTQ9Y2C2 406 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 J3QL48 77 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 PGK1P00558 417 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 FGBP02675 491 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 COPB2P35606 906 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 EPHB4P54760 987 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
CASP4-201ENST00000393150 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 TRIM50Q86XT4 487 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 ANKMY2Q8IV38 441 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 SIX5Q8N196 739 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 SNIP1Q8TAD8 396 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 MMP19Q99542 508 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 MOV10L1Q9BXT6 1211 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 DNAAF2Q9NVR5 837 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 HMG20BQ9P0W2 317 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 BTBD7Q9P203 1132 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 SAP30BPQ9UHR5 308 aaKnown RBP9.56□□□□□ -0.88
CASP4-201ENST00000393150 SERPINB13Q9UIV8 391 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 FAM184BQ9ULE4 1060 aa9.56□□□□□ -0.88
CASP4-201ENST00000393150 ELP1O95163 1332 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 FLT1P17948 1338 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 ZNF521Q96K83 1311 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
CASP4-201ENST00000393150 ERC2O15083 957 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 CNMDO75829 334 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 BMP1P13497 986 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 ITGB8P26012 769 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
CASP4-201ENST00000393150 ACLYP53396 1101 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 TTC39AQ5SRH9 613 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 TMEM240Q5SV17 173 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 ZNF365Q70YC5 407 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 MAML3Q96JK9 1138 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 TINF2Q9BSI4 451 aa9.55□□□□□ -0.88
CASP4-201ENST00000393150 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
CASP4-201ENST00000393150 DIS3Q9Y2L1 958 aaKnown RBP9.55□□□□□ -0.88
CASP4-201ENST00000393150 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
CASP4-201ENST00000393150 GRXCR1A8MXD5 290 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 KIF28PB7ZC32 967 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 FLOT1O75955 427 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 POLR3DP05423 398 aaPredicted RBP9.54□□□□□ -0.88
CASP4-201ENST00000393150 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PRR20EP86478 221 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PRR20CP86479 221 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PRR20DP86480 221 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PRR20BP86481 221 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PRR20AP86496 221 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 TFCP2Q12800 502 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 DPYDQ12882 1025 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 NNTQ13423 1086 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
CASP4-201ENST00000393150 NECAB3Q96P71 396 aaPredicted RBP9.54□□□□□ -0.88
CASP4-201ENST00000393150 UIMC1Q96RL1 719 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 NKX2-4Q9H2Z4 354 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 ARHGEF10LQ9HCE6 1279 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 IL23AQ9NPF7 189 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 PA2G4Q9UQ80 394 aaKnown RBP9.54□□□□□ -0.88
CASP4-201ENST00000393150 SLC4A7Q9Y6M7 1214 aa9.54□□□□□ -0.88
CASP4-201ENST00000393150 LTBP2Q14767 1821 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 MUC6Q6W4X9 2439 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 A0A0U1RQG5 324 aaPredicted RBP9.53□□□□□ -0.88
CASP4-201ENST00000393150 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 SRGAP3O43295 1099 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 ZEB2O60315 1214 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 COBLO75128 1261 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 C6orf222P0C671 652 aaPredicted RBP9.53□□□□□ -0.88
CASP4-201ENST00000393150 CSF2RAP15509 400 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 ADGRE1Q14246 886 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 KCNA10Q16322 511 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 TATDN1Q6P1N9 297 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 DDX11Q96FC9 970 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 SEZ6LQ9BYH1 1024 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 EHD4Q9H223 541 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
CASP4-201ENST00000393150 RLFQ13129 1914 aa9.52□□□□□ -0.89
CASP4-201ENST00000393150 ARVCFO00192 962 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms