RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
CALD1-203ENST00000393118 WNT7AO00755 349 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 SBK1Q52WX2 424 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 GDF11O95390 407 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 TTLL1O95922 423 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 APBA3O96018 575 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 RASA1P20936 1047 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 LIG3P49916 1009 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 CYP4A11Q02928 519 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 RPAINQ86UA6 219 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 SCN11AQ9UI33 1791 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 CFBP00751 764 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
CALD1-203ENST00000393118 NR1I3Q14994 352 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
CALD1-203ENST00000393118 OGFOD1Q8N543 542 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 FAM107BQ9H098 131 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 MRPL44Q9H9J2 332 aaKnown RBP11.69□□□□□ -0.54
CALD1-203ENST00000393118 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 FCER1AP12319 257 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 AKR1B1P15121 316 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 MAGEA1P43355 309 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 SARNPP82979 210 aaKnown RBP11.69□□□□□ -0.54
CALD1-203ENST00000393118 GRIK5Q16478 980 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 LRCH2Q5VUJ6 765 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 NUP58Q9BVL2 599 aa11.69□□□□□ -0.54
CALD1-203ENST00000393118 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
CALD1-203ENST00000393118 NEBLO76041 1014 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 TDP2O95551 362 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
CALD1-203ENST00000393118 SLFN13Q68D06 897 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 IFIH1Q9BYX4 1025 aaKnown RBP11.68□□□□□ -0.54
CALD1-203ENST00000393118 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 LAD1O00515 517 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
CALD1-203ENST00000393118 VPS72Q15906 364 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
CALD1-203ENST00000393118 RAD9BQ6WBX8 426 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 AK8Q96MA6 479 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 PARD6BQ9BYG5 372 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 POLD4Q9HCU8 107 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 MYO6Q9UM54 1294 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54
CALD1-203ENST00000393118 TTC26A0AVF1 554 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 PPP1R2P41236 205 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 HLTFQ14527 1009 aaKnown RBP eCLIP11.68□□□□□ -0.544e-6■■□□□ 14.4
CALD1-203ENST00000393118 PTPROQ16827 1216 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 ASPRV1Q53RT3 343 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 MAEAQ7L5Y9 396 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 MYOCDQ8IZQ8 938 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 GJA10Q969M2 543 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 SAR1BQ9Y6B6 198 aa11.68□□□□□ -0.54
CALD1-203ENST00000393118 FLT1P17948 1338 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 NDUFA10O95299 355 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 CCNE1P24864 410 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 ICA1Q05084 483 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
CALD1-203ENST00000393118 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 VPS36Q86VN1 386 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 LRRN4CLQ8ND94 238 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 SMCR8Q8TEV9 937 aaPredicted RBP11.67□□□□□ -0.54
CALD1-203ENST00000393118 CHP1Q99653 195 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 IL17RBQ9NRM6 502 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 ZMYND10O75800 440 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 ALDH1B1P30837 517 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
CALD1-203ENST00000393118 FAM26FQ5R3K3 315 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 TTBK2Q6IQ55 1244 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 DHTKD1Q96HY7 919 aaPredicted RBP11.67□□□□□ -0.54
CALD1-203ENST00000393118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
CALD1-203ENST00000393118 MEIS1O00470 390 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 EBAG9O00559 213 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 ZFYVE27Q5T4F4 411 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 CCDC174Q6PII3 467 aa11.67□□□□□ -0.54
CALD1-203ENST00000393118 PANK4Q9NVE7 773 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms