RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 RFC2P35250 354 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 PDE4BQ07343 736 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 DUSP28Q4G0W2 176 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 MORC4Q8TE76 937 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 CHMP4BQ9H444 224 aaKnown RBP25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 ECHDC1Q9NTX5 307 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 DDX49Q9Y6V7 483 aaKnown RBP25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 TANC1Q9C0D5 1861 aa25.38■■□□□ 1.65
CNEP1R1-201ENST00000389134 RNF113AO15541 343 aaKnown RBP25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 TLL1O43897 1013 aa25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 ZFYP08048 801 aaPredicted RBP25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 PPP4R3BQ5MIZ7 849 aa25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 TMEM63BQ5T3F8 832 aa25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 CERS4Q9HA82 394 aa25.37■■□□□ 1.65
CNEP1R1-201ENST00000389134 KIF28PB7ZC32 967 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 PATL2C9JE40 543 aaKnown RBP25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 SLC3A2P08195 630 aaKnown RBP25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 MCCP23508 829 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 CPT1AP50416 773 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 HNRNPUQ00839 825 aaKnown RBP eCLIP25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 TFAP4Q01664 338 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 MUM1L1Q5H9M0 696 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 TMEM31Q5JXX7 168 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 HLA-CQ95604 372 aa25.36■■□□□ 1.65
CNEP1R1-201ENST00000389134 EPOPA6NHQ4 379 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 PURAQ00577 322 aaKnown RBP25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 RCSD1Q6JBY9 416 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 NSMFQ6X4W1 530 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 IFNL3Q8IZI9 196 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 ARNTL2Q8WYA1 636 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 WDR11Q9BZH6 1224 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 NACAP1Q9BZK3 213 aa25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 GPHNQ9NQX3 736 aaPredicted RBP25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 ADD3Q9UEY8 706 aaKnown RBP25.35■■□□□ 1.65
CNEP1R1-201ENST00000389134 LOC102724159A0A0B4J2E5 919 aa25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 TAP1Q03518 808 aa25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 PWP2Q15269 919 aaKnown RBP25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 MTG1Q9BT17 334 aaPredicted RBP25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 CCPG1Q9ULG6 757 aa25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 PRR12Q9ULL5 1215 aa25.34■■□□□ 1.65
CNEP1R1-201ENST00000389134 PTPRSQ13332 1948 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 PITPNM1O00562 1244 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 MYL3P08590 195 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 BRDTQ58F21 947 aaPredicted RBP25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 KRT40Q6A162 431 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 KCTD1Q719H9 257 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 RETREG2Q8NC44 543 aa25.33■■□□□ 1.65
CNEP1R1-201ENST00000389134 SMARCA5O60264 1052 aaPredicted RBP25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 IQCF3P0C7M6 154 aa25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 SNAP25P60880 206 aa25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 HERC6Q8IVU3 1022 aa25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 CHMP4CQ96CF2 233 aa25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 GPATCH3Q96I76 525 aa25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 FTOQ9C0B1 505 aaKnown RBP eCLIP25.32■■□□□ 1.64
CNEP1R1-201ENST00000389134 RBM47A0AV96 593 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 M0R2C6 588 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 GPR37L1O60883 481 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 ICAM1P05362 532 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 ALDH5A1P51649 535 aaPredicted RBP25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 LRRFIP1Q32MZ4 808 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 NBPF20Q3BBV1 942 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 FAM47CQ5HY64 1035 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 NFRKBQ6P4R8 1299 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 OR6J1Q8NGC5 347 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 PURBQ96QR8 312 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 STX8Q9UNK0 236 aa25.31■■□□□ 1.64
CNEP1R1-201ENST00000389134 KPNA6O60684 536 aa25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 BAIAP3O94812 1187 aa25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 PTPN11Q06124 597 aaPredicted RBP25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 GRB10Q13322 594 aa25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 BFSP2Q13515 415 aa25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 BAATQ14032 418 aaPredicted RBP25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 RAD50Q92878 1312 aa25.3■■□□□ 1.64
CNEP1R1-201ENST00000389134 COL4A4P53420 1690 aaPredicted RBP25.29■■□□□ 1.64
CNEP1R1-201ENST00000389134 PPARAQ07869 468 aa25.29■■□□□ 1.64
CNEP1R1-201ENST00000389134 NAPBQ9H115 298 aa25.29■■□□□ 1.64
CNEP1R1-201ENST00000389134 NKRFO15226 690 aaKnown RBP eCLIP25.28■■□□□ 1.64
CNEP1R1-201ENST00000389134 ARHGEF15O94989 841 aa25.28■■□□□ 1.64
CNEP1R1-201ENST00000389134 LMCD1Q9NZU5 365 aa25.28■■□□□ 1.64
CNEP1R1-201ENST00000389134 TSPY2A6NKD2 308 aa25.27■■□□□ 1.64
CNEP1R1-201ENST00000389134 RANBP17Q9H2T7 1088 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-201ENST00000389134 LPXNO60711 386 aa25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 KCNJ6P48051 423 aa25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 PPP2R5BQ15173 497 aa25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 DCAF4Q8WV16 495 aa25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 MPHOSPH6Q99547 160 aaKnown RBP25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 NOD1Q9Y239 953 aa25.26■■□□□ 1.63
CNEP1R1-201ENST00000389134 PTPDC1A2A3K4 754 aa25.25■■□□□ 1.63
CNEP1R1-201ENST00000389134 A6NJR5 290 aa25.25■■□□□ 1.63
CNEP1R1-201ENST00000389134 IL17RBQ9NRM6 502 aa25.25■■□□□ 1.63
CNEP1R1-201ENST00000389134 SIP14410 1827 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 PI4K2BG5E9Z4 385 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 CCDC96Q2M329 555 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 BTNL9Q6UXG8 535 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 CCDC155Q8N6L0 562 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 SCFD2Q8WU76 684 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 KHSRPQ92945 711 aaKnown RBP eCLIP25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 C11orf16Q9NQ32 467 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 MTMR7Q9Y216 660 aa25.24■■□□□ 1.63
CNEP1R1-201ENST00000389134 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms