RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 A0A1B0GTH6 734 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 SPECC1LQ69YQ0 1117 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 NELFBQ8WX92 580 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 CCSER1Q9C0I3 900 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 TMX1Q9H3N1 280 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
PDX1-201ENST00000381033 TCP10L2B9ZVM9 353 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 HMGB2P26583 209 aaKnown RBP19.32■□□□□ 0.68
PDX1-201ENST00000381033 SLC1A4P43007 532 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 ZNF658Q5TYW1 1059 aaPredicted RBP19.32■□□□□ 0.68
PDX1-201ENST00000381033 CC2D2BQ6DHV5 1058 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 EHD4Q9H223 541 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
PDX1-201ENST00000381033 KBTBD4Q9NVX7 518 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 STK32BQ9NY57 414 aa19.32■□□□□ 0.68
PDX1-201ENST00000381033 PRPHP41219 470 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 SPICE1Q8N0Z3 855 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 VPS16Q9H269 839 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
PDX1-201ENST00000381033 SMCHD1A6NHR9 2005 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 ESYT2A0FGR8 921 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 ZBTB5O15062 677 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 QRICH1Q2TAL8 776 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 MTMR9Q96QG7 549 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
PDX1-201ENST00000381033 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
PDX1-201ENST00000381033 PAK1Q13153 545 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 DHX36Q9H2U1 1008 aaKnown RBP19.3■□□□□ 0.68
PDX1-201ENST00000381033 LOC102724159A0A0B4J2E5 919 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 LAD1O00515 517 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 GH2P01242 217 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 FCER1AP12319 257 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDX1-201ENST00000381033 ICA1Q05084 483 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 MTF1Q14872 753 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 PWP2Q15269 919 aaKnown RBP19.3■□□□□ 0.68
PDX1-201ENST00000381033 CALCRLQ16602 461 aa19.3■□□□□ 0.68
PDX1-201ENST00000381033 P2RX7Q99572 595 aaKnown RBP19.3■□□□□ 0.68
PDX1-201ENST00000381033 MYO3BQ8WXR4 1341 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 NKRFO15226 690 aaKnown RBP eCLIP19.29■□□□□ 0.68
PDX1-201ENST00000381033 MYO1BO43795 1136 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 KRT31Q15323 416 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 TATDN1Q6P1N9 297 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 CCDC17Q96LX7 622 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 RIC8AQ9NPQ8 531 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 TAB2Q9NYJ8 693 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 COL4A5P29400 1685 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 F5H6K3 240 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 FANCGO15287 622 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 KLRC3Q07444 240 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 RBL2Q08999 1139 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 GPATCH4Q5T3I0 446 aaKnown RBP19.29■□□□□ 0.68
PDX1-201ENST00000381033 IRF2BP1Q8IU81 584 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 MRIQ9BWK5 157 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 PSTPIP2Q9H939 334 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 MYH7BA7E2Y1 1941 aa19.29■□□□□ 0.68
PDX1-201ENST00000381033 RNF225M0QZC1 329 aaPredicted RBP19.28■□□□□ 0.68
PDX1-201ENST00000381033 CLK2P49760 499 aaKnown RBP19.28■□□□□ 0.68
PDX1-201ENST00000381033 STK4Q13043 487 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 ECM1Q16610 540 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 SYT10Q6XYQ8 523 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 TOGARAM2Q6ZUX3 1019 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 FAM177A1Q8N128 213 aaPredicted RBP19.28■□□□□ 0.68
PDX1-201ENST00000381033 DESI2Q9BSY9 194 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 KANSL2Q9H9L4 492 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 RWDD2AQ9UIY3 292 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 PCDHA1Q9Y5I3 950 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 PSMD14O00487 310 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 ECE1P42892 770 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 GRB10Q13322 594 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 ABCB5Q2M3G0 1257 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 USH1GQ495M9 461 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 ADSSL1Q8N142 457 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 MTMR8Q96EF0 704 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 BAG1Q99933 345 aaPredicted RBP19.28■□□□□ 0.68
PDX1-201ENST00000381033 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
PDX1-201ENST00000381033 TRIM9Q9C026 710 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 LRWD1Q9UFC0 647 aa19.28■□□□□ 0.68
PDX1-201ENST00000381033 A0A0U1RQJ8 604 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 KCNA3P22001 575 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 HDLBPQ00341 1268 aaKnown RBP19.27■□□□□ 0.68
PDX1-201ENST00000381033 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
PDX1-201ENST00000381033 ATRIPQ8WXE1 791 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 HAS1Q92839 578 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 PNMA5Q96PV4 448 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDX1-201ENST00000381033 V9GYY5 206 aaPredicted RBP19.27■□□□□ 0.68
PDX1-201ENST00000381033 MAFGO15525 162 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 DPEP1P16444 411 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 MCM6Q14566 821 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 CUL5Q93034 780 aa19.27■□□□□ 0.68
PDX1-201ENST00000381033 BLOC1S4Q9NUP1 217 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms