RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
CLCN4-201ENST00000380829 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 TMEM232C9JQI7 657 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 GH2P01242 217 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 TNNI2P48788 182 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
CLCN4-201ENST00000380829 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 LCMT1Q9UIC8 334 aa16.05■□□□□ 0.16
CLCN4-201ENST00000380829 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
CLCN4-201ENST00000380829 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 VIL1P09327 827 aaKnown RBP16.04■□□□□ 0.16
CLCN4-201ENST00000380829 TECP42680 631 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 GYS2P54840 703 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 FAM193AP78312 1265 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 C10orf67Q8IYJ2 551 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
CLCN4-201ENST00000380829 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 COBLO75128 1261 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 TDP2O95551 362 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 ZNF18P17022 549 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 ERCC5P28715 1186 aaPredicted RBP16.04■□□□□ 0.16
CLCN4-201ENST00000380829 GSDMDP57764 484 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 ARMCX5Q6P1M9 558 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 MTMR8Q96EF0 704 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 GMLQ99445 158 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 INTS13Q9NVM9 706 aa16.04■□□□□ 0.16
CLCN4-201ENST00000380829 SYNRGQ9UMZ2 1314 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 PPP1R3GB7ZBB8 358 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 F5H6K3 240 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 CBFA2T2O43439 604 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 SLC37A4O43826 429 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 EDIL3O43854 480 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 SNAP25P60880 206 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 KLRC3Q07444 240 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 DLGAP5Q15398 846 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
CLCN4-201ENST00000380829 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 CCSER1Q9C0I3 900 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 TXKP42681 527 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 ARHGAP29Q52LW3 1261 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 PPP1R18Q6NYC8 613 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 CABP7Q86V35 215 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 CUL5Q93034 780 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLCN4-201ENST00000380829 ZNF70Q9UC06 446 aaPredicted RBP16.03■□□□□ 0.16
CLCN4-201ENST00000380829 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
CLCN4-201ENST00000380829 PSME4Q14997 1843 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 MYO1BO43795 1136 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 SEC31AO94979 1220 aaKnown RBP16.02■□□□□ 0.16
CLCN4-201ENST00000380829 RPN1P04843 607 aaKnown RBP16.02■□□□□ 0.16
CLCN4-201ENST00000380829 CDC37Q16543 378 aaPredicted RBP16.02■□□□□ 0.16
CLCN4-201ENST00000380829 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 VEZTQ9HBM0 779 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.16
CLCN4-201ENST00000380829 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.16
CLCN4-201ENST00000380829 NDUFB10O96000 172 aa16.02■□□□□ 0.15
CLCN4-201ENST00000380829 PLCG1P19174 1290 aa16.02■□□□□ 0.15
CLCN4-201ENST00000380829 CALCRLQ16602 461 aa16.02■□□□□ 0.15
CLCN4-201ENST00000380829 CDAN1Q8IWY9 1227 aa16.02■□□□□ 0.15
CLCN4-201ENST00000380829 AK8Q96MA6 479 aa16.02■□□□□ 0.15
CLCN4-201ENST00000380829 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLCN4-201ENST00000380829 CLK2P49760 499 aaKnown RBP16.01■□□□□ 0.15
CLCN4-201ENST00000380829 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
CLCN4-201ENST00000380829 VSTM4Q8IW00 320 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 NIM1KQ8IY84 436 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 SPICE1Q8N0Z3 855 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
CLCN4-201ENST00000380829 GDAQ9Y2T3 454 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
CLCN4-201ENST00000380829 A0A1W2PRG0 241 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L15C9J2P7 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L11C9JVI0 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L18D6R9N7 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L22D6RA61 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L19D6RCP7 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L20D6RJB6 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 MRPL12P52815 198 aaKnown RBP16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L24Q0WX57 530 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 SPATA1Q5VX52 437 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 USP17L6PQ6QN14 398 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 MTMR9Q96QG7 549 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 ZNRF3Q9ULT6 936 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 CCDC150Q8NCX0 1101 aa16■□□□□ 0.15
CLCN4-201ENST00000380829 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
CLCN4-201ENST00000380829 MYO1CO00159 1063 aa15.99■□□□□ 0.15
CLCN4-201ENST00000380829 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
CLCN4-201ENST00000380829 ECE1P42892 770 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms