RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 SPON1Q9HCB6 807 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 CDC42BPGQ6DT37 1551 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 A6NJR5 290 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 WDR64B1ANS9 1081 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 S100BP04271 92 aaPredicted RBP7.85□□□□□ -1.15
CCDC171-201ENST00000380701 FAM47AQ5JRC9 791 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 MFSD14CQ5VZR4 134 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 ZNF577Q9BSK1 485 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 TOPORSQ9NS56 1045 aaPredicted RBP7.85□□□□□ -1.15
CCDC171-201ENST00000380701 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 MBD5Q9P267 1494 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 RFX7Q2KHR2 1363 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 SCNN1DP51172 638 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 RNASELQ05823 741 aaKnown RBP7.85□□□□□ -1.15
CCDC171-201ENST00000380701 GOLGA8FQ08AF8 430 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 GOLGA8DPQ0D2H9 430 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 POLA2Q14181 598 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 ERFEQ4G0M1 354 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 VPS16Q9H269 839 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 SUGCTQ9HAC7 445 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 HHATQ5VTY9 493 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 STMN2Q93045 179 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 MMS19Q96T76 1030 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 VPS54Q9P1Q0 977 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 FEM1BQ9UK73 627 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 KCNH4Q9UQ05 1017 aa7.85□□□□□ -1.15
CCDC171-201ENST00000380701 DYMQ7RTS9 669 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 PALM2Q8IXS6 379 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 MCPH1Q8NEM0 835 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 HOMER3Q9NSC5 361 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 MID2Q9UJV3 735 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 METP08581 1390 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 HNRNPDLO14979 420 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 PPFIA4O75335 1185 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 MMP10P09238 476 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 H2AFZP0C0S5 128 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 APBA1Q02410 837 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 H2AFVQ71UI9 128 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 RSRC2Q7L4I2 434 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 ELMOD1Q8N336 334 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 EDEM3Q9BZQ6 932 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 OSBPL3Q9H4L5 887 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 GREM2Q9H772 168 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 ZSWIM6Q9HCJ5 1215 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 LZTFL1Q9NQ48 299 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 CPSF3Q9UKF6 684 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 PNMA6EA0A0J9YXQ4 647 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 TCP1P17987 556 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 EEF1GP26641 437 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 PSMC2P35998 433 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 TNS3Q68CZ2 1445 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 CCDC105Q8IYK2 499 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 UBLCP1Q8WVY7 318 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 IFT81Q8WYA0 676 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 ABCB11O95342 1321 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 AFF2P51816 1311 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 TLDC2A0PJX2 215 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 PPP6R2O75170 966 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 NEDD9Q14511 834 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 TKFCQ3LXA3 575 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 C10orf76Q5T2E6 689 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 CCDC62Q6P9F0 684 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 BRINP3Q76B58 766 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 MXD3Q9BW11 206 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 ZSWIM4Q9H7M6 989 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 MRPL47Q9HD33 250 aaKnown RBP7.84□□□□□ -1.15
CCDC171-201ENST00000380701 ST7Q9NRC1 585 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 TBC1D22BQ9NU19 505 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
CCDC171-201ENST00000380701 FMNL1O95466 1100 aaPredicted RBP7.84□□□□□ -1.16
CCDC171-201ENST00000380701 HSPA1LP34931 641 aa7.84□□□□□ -1.16
CCDC171-201ENST00000380701 LIFRP42702 1097 aa7.84□□□□□ -1.16
CCDC171-201ENST00000380701 RASSF2P50749 326 aa7.84□□□□□ -1.16
CCDC171-201ENST00000380701 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.16
CCDC171-201ENST00000380701 ANAPC5Q9UJX4 755 aa7.84□□□□□ -1.16
CCDC171-201ENST00000380701 ZHX1Q9UKY1 873 aaPredicted RBP7.84□□□□□ -1.16
CCDC171-201ENST00000380701 SHROOM2Q13796 1616 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 WHAMMP3Q1A5X7 153 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 C8orf34Q49A92 452 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 KLHDC4Q8TBB5 520 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 POMGNT1Q8WZA1 660 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 IFIH1Q9BYX4 1025 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 C2orf40Q9H1Z8 148 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 VCX3BQ9H321 246 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 HAUS4Q9H6D7 363 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ASB14A6NK59 587 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 USP17L5A8MUK1 530 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 CEP104O60308 925 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 TRIM42Q8IWZ5 723 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 SRRM1Q8IYB3 904 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 LRRC47Q8N1G4 583 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 PPP4R1Q8TF05 950 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 EAF2Q96CJ1 260 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms