RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GTPBP6O43824 516 aaPredicted RBP22.42■■□□□ 1.18
PDLIM5-205ENST00000380180 CUL4BQ13620 913 aa22.42■■□□□ 1.18
PDLIM5-205ENST00000380180 CABP7Q86V35 215 aa22.42■■□□□ 1.18
PDLIM5-205ENST00000380180 IGSF22Q8N9C0 903 aa22.42■■□□□ 1.18
PDLIM5-205ENST00000380180 PLIN2Q99541 437 aa22.42■■□□□ 1.18
PDLIM5-205ENST00000380180 KIF4BQ2VIQ3 1234 aa22.41■■□□□ 1.18
PDLIM5-205ENST00000380180 CCDC186Q7Z3E2 898 aa22.41■■□□□ 1.18
PDLIM5-205ENST00000380180 SH2D4AQ9H788 454 aa22.41■■□□□ 1.18
PDLIM5-205ENST00000380180 PTGS1P23219 599 aa22.41■■□□□ 1.18
PDLIM5-205ENST00000380180 FMR1Q06787 632 aaKnown RBP eCLIP22.41■■□□□ 1.183e-9■■■■■ 33
PDLIM5-205ENST00000380180 FANCLQ9NW38 375 aa22.41■■□□□ 1.18
PDLIM5-205ENST00000380180 POLR2AP24928 1970 aaKnown RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 ZNF500O60304 480 aaPredicted RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 ATP1A3P13637 1013 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 TAL1P17542 331 aaPredicted RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 FXR2P51116 673 aaKnown RBP eCLIP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 ANO3Q9BYT9 981 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 DEFB129Q9H1M3 183 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 KCNF1Q9H3M0 494 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 DDX25Q9UHL0 483 aaKnown RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 LRRC15Q8TF66 581 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 CHURC1Q8WUH1 139 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 MMTAG2Q9BU76 263 aaKnown RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 XPO4Q9C0E2 1151 aaKnown RBP22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 IFNKQ9P0W0 207 aa22.4■■□□□ 1.18
PDLIM5-205ENST00000380180 GCFC2P16383 781 aaKnown RBP22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 PLCG1P19174 1290 aa22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 AP3B2Q13367 1082 aa22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 ARHGAP27Q6ZUM4 889 aa22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 ENOX1Q8TC92 643 aaKnown RBP22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 MED15Q96RN5 788 aa22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 P2RX7Q99572 595 aaKnown RBP22.39■■□□□ 1.17
PDLIM5-205ENST00000380180 H7C1D1 291 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 OPLAHO14841 1288 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 CD44P16070 742 aaKnown RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 ERCC5P28715 1186 aaPredicted RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 USP11P51784 963 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 FANCCQ00597 558 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 TMEM266Q2M3C6 531 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 CCDC144BQ3MJ40 725 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 HAS1Q92839 578 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 KIFC2Q96AC6 838 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 KBTBD4Q9NVX7 518 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 LRWD1Q9UFC0 647 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 PDIA5Q14554 519 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 CT47A1Q5JQC4 288 aaPredicted RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 TRMT44Q8IYL2 757 aaKnown RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 SMYD4Q8IYR2 804 aaPredicted RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 NAP1L4Q99733 375 aaKnown RBP22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 ZNF341Q9BYN7 854 aa22.38■■□□□ 1.17
PDLIM5-205ENST00000380180 PLA2G6O60733 806 aa22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 NBPF12Q5TAG4 269 aaPredicted RBP22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 MCTP2Q6DN12 878 aa22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 CUEDC2Q9H467 287 aa22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 SPON1Q9HCB6 807 aa22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 NFE2L3Q9Y4A8 694 aa22.37■■□□□ 1.17
PDLIM5-205ENST00000380180 PPP1R3GB7ZBB8 358 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 RPN1P04843 607 aaKnown RBP22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 FEZ1Q99689 392 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 RAB34Q9BZG1 259 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 POTEMA6NI47 508 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 CTNND1O60716 968 aaKnown RBP22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 CCDC174Q6PII3 467 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 FAM160B2Q86V87 743 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 CRYGNQ8WXF5 182 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 CALML4Q96GE6 196 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 FBXO28Q9NVF7 368 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 FEM1BQ9UK73 627 aa22.36■■□□□ 1.17
PDLIM5-205ENST00000380180 CYP3A7-CYP3A51PA0A087WV96 503 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 SPDYE3A6NKU9 549 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 FOSP01100 380 aaPredicted RBP22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 MYL1P05976 194 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 LMNB1P20700 586 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 CYP3A7P24462 503 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 TRAF1Q13077 416 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 KLHL10Q6JEL2 608 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 GJA10Q969M2 543 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 RMND1Q9NWS8 449 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 MARCH6O60337 910 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 SERPINC1P01008 464 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 ARHGAP4P98171 946 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 SAMD1Q6SPF0 538 aaPredicted RBP22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 MAGEF1Q9HAY2 307 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 GPRC5DQ9NZD1 345 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 DOCK1Q14185 1865 aa22.35■■□□□ 1.17
PDLIM5-205ENST00000380180 UBASH3AP57075 661 aa22.34■■□□□ 1.17
PDLIM5-205ENST00000380180 HSP90AA4PQ58FG1 418 aa22.34■■□□□ 1.17
PDLIM5-205ENST00000380180 GINM1Q9NU53 330 aa22.34■■□□□ 1.17
PDLIM5-205ENST00000380180 PCDHA12Q9UN75 941 aa22.34■■□□□ 1.17
PDLIM5-205ENST00000380180 PIK3CDO00329 1044 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 ZNF18P17022 549 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 INPP5BP32019 993 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 GRB10Q13322 594 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 ZNF658Q5TYW1 1059 aaPredicted RBP22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 FILIP1Q7Z7B0 1213 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 GPC2Q8N158 579 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 TRPM4Q8TD43 1214 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms