RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 NSMFQ6X4W1 530 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 TEX2Q8IWB9 1127 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 BRCA2P51587 3418 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 DOCK3Q8IZD9 2030 aa13.75□□□□□ -0.21
PCNA-201ENST00000379143 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 COBLO75128 1261 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 PGK2P07205 417 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 SCG2P13521 617 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 GHRHRQ02643 423 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 PFKFB3Q16875 520 aaPredicted RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 OLFML2BQ68BL8 750 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 PHKBQ93100 1093 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 MAML3Q96JK9 1138 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
PCNA-201ENST00000379143 ZNFX1Q9P2E3 1918 aaKnown RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 ADD3Q9UEY8 706 aaKnown RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 BAZ2BQ9UIF8 2168 aaKnown RBP13.74□□□□□ -0.21
PCNA-201ENST00000379143 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 STK36Q9NRP7 1315 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 LOC102724159A0A0B4J2E5 919 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 DEXIO95424 95 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 CFBP00751 764 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 HMGCRP04035 888 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 TAL1P17542 331 aaPredicted RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 UBXN2AP68543 259 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 BAATQ14032 418 aaPredicted RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 PWP2Q15269 919 aaKnown RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 FAM177A1Q8N128 213 aaPredicted RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 NPLOC4Q8TAT6 608 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
PCNA-201ENST00000379143 GLT8D2Q9H1C3 349 aa13.73□□□□□ -0.21
PCNA-201ENST00000379143 SMCHD1A6NHR9 2005 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 B4DLN1 442 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
PCNA-201ENST00000379143 LARGE1O95461 756 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 ELNP15502 786 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 CALML3P27482 149 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 HSD17B4P51659 736 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
PCNA-201ENST00000379143 NAPAP54920 295 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 PKN1Q16512 942 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 DNERQ8NFT8 737 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 TRIB2Q92519 343 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 WASF1Q92558 559 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 CUL5Q93034 780 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 LLPHQ9BRT6 129 aaKnown RBP13.72□□□□□ -0.21
PCNA-201ENST00000379143 PSTPIP2Q9H939 334 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
PCNA-201ENST00000379143 BIN2Q9UBW5 565 aaPredicted RBP13.72□□□□□ -0.21
PCNA-201ENST00000379143 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 ASB14A6NK59 587 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 STXBP3O00186 592 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 OPLAHO14841 1288 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 XBP1P17861 261 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 CCL14Q16627 93 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PCNA-201ENST00000379143 ARMC5Q96C12 935 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
PCNA-201ENST00000379143 ESYT2A0FGR8 921 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 CTDNEP1O95476 244 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 INHAP05111 366 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
PCNA-201ENST00000379143 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
PCNA-201ENST00000379143 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 FLRT1Q9NZU1 646 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 NRBP1Q9UHY1 535 aa13.7□□□□□ -0.22
PCNA-201ENST00000379143 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 IGHA2P01877 340 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 GNA11P29992 359 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 ALDH5A1P51649 535 aaPredicted RBP13.69□□□□□ -0.22
PCNA-201ENST00000379143 ADCY7P51828 1080 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
PCNA-201ENST00000379143 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 NSUN6Q8TEA1 469 aaKnown RBP13.69□□□□□ -0.22
PCNA-201ENST00000379143 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
PCNA-201ENST00000379143 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms