RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 PAPOLBQ9NRJ5 636 aaKnown RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 A0A1B0GVG6 124 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 OPA1O60313 960 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 DEXIO95424 95 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 GCLCP48506 637 aaPredicted RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 DNAAF2Q9NVR5 837 aaKnown RBP17.22■□□□□ 0.35
FXN-201ENST00000377270 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 TRPC6Q9Y210 931 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
FXN-201ENST00000377270 MYO1BO43795 1136 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
FXN-201ENST00000377270 SEC23AQ15436 765 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 RC3H1Q5TC82 1133 aaKnown RBP17.21■□□□□ 0.35
FXN-201ENST00000377270 CCDC50Q8IVM0 306 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 PRDM1O75626 825 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 VSNL1P62760 191 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 MPP3Q13368 585 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 TUBB2AQ13885 445 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 PTPN21Q16825 1174 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 RESP18Q5W5W9 173 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 B4GALNT4Q76KP1 1039 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
FXN-201ENST00000377270 RGL2O15211 777 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 TUBBP07437 444 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 TPTE2Q6XPS3 522 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 CCDC13Q8IYE1 715 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 PDILTQ8N807 584 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 TPX2Q9ULW0 747 aaKnown RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 GNAT1P11488 350 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 SLC8A1P32418 973 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 TOB1P50616 345 aaPredicted RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 RCAN1P53805 252 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 MECOMQ03112 1051 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 INF2Q27J81 1249 aa17.2■□□□□ 0.34
FXN-201ENST00000377270 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
FXN-201ENST00000377270 CACNA1SQ13698 1873 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 SEMA3EO15041 775 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 SFSWAPQ12872 951 aaKnown RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 NR5A1Q13285 461 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 GET4Q7L5D6 327 aaPredicted RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 GORASP1Q9BQQ3 440 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 DESI2Q9BSY9 194 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 ANKRD2Q9GZV1 360 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 FOXP1Q9H334 677 aaPredicted RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 CORO1CQ9ULV4 474 aaPredicted RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 USP17L21D6R901 530 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 EIF3HO15372 352 aaKnown RBP eCLIP17.19■□□□□ 0.34
FXN-201ENST00000377270 RHOXF2BP0C7M4 288 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 CDC25CP30307 473 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 RHOXF2Q9BQY4 288 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 TRIM7Q9C029 511 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 INTS13Q9NVM9 706 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
FXN-201ENST00000377270 ZNF831Q5JPB2 1677 aa17.19■□□□□ 0.34
FXN-201ENST00000377270 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
FXN-201ENST00000377270 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
FXN-201ENST00000377270 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 SPECC1Q5M775 1068 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
FXN-201ENST00000377270 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 VIPAS39Q9H9C1 493 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 AATFQ9NY61 560 aaKnown RBP eCLIP17.18■□□□□ 0.34
FXN-201ENST00000377270 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 FAM237AA0A1B0GTK4 181 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 CCDC175P0C221 793 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 FERP16591 822 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 PNOCQ13519 176 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 PLCB4Q15147 1175 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 LONRF3Q496Y0 759 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 RILPL1Q5EBL4 403 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 SPTY2D1Q68D10 685 aaPredicted RBP17.18■□□□□ 0.34
FXN-201ENST00000377270 FAM76AQ8TAV0 307 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 GRIN2DO15399 1336 aa17.18■□□□□ 0.34
FXN-201ENST00000377270 ZNF189O75820 626 aaPredicted RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 EIF4BP23588 611 aaKnown RBP17.17■□□□□ 0.34
FXN-201ENST00000377270 GJA8P48165 433 aa17.17■□□□□ 0.34
FXN-201ENST00000377270 ADKP55263 362 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms