RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 PDE4DQ08499 809 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 BRIP1Q9BX63 1249 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 KRT14P02533 472 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 PRLRP16471 622 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 FIGNQ5HY92 759 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 ZSCAN29Q8IWY8 852 aaPredicted RBP25.62■■□□□ 1.69
FOXA2-201ENST00000377115 RBM12Q9NTZ6 932 aaKnown RBP25.62■■□□□ 1.69
FOXA2-201ENST00000377115 SALL4Q9UJQ4 1053 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 PLAGL2Q9UPG8 496 aa25.62■■□□□ 1.69
FOXA2-201ENST00000377115 COL1A1P02452 1464 aaPredicted RBP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 NDUFAB1O14561 156 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 CALML3P27482 149 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 EIF4A3P38919 411 aaKnown RBP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 ALS2CLQ60I27 953 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 ANKRD13CQ8N6S4 541 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 NCAPGQ9BPX3 1015 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 FAM207AQ9NSI2 230 aaPredicted RBP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 PCDHA4Q9UN74 947 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 COL22A1Q8NFW1 1626 aaPredicted RBP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 CACNA1SQ13698 1873 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 MYL1P05976 194 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 TCP1P17987 556 aaKnown RBP25.61■■□□□ 1.69
FOXA2-201ENST00000377115 ZNF384Q8TF68 577 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 HPS3Q969F9 1004 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 CAVIN3Q969G5 261 aa25.61■■□□□ 1.69
FOXA2-201ENST00000377115 BICDL2A1A5D9 508 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 PLCG1P19174 1290 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 IGHMBP2P38935 993 aaKnown RBP25.6■■□□□ 1.69
FOXA2-201ENST00000377115 INF2Q27J81 1249 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 SWT1Q5T5J6 900 aaKnown RBP25.6■■□□□ 1.69
FOXA2-201ENST00000377115 C8orf74Q6P047 294 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 POTEDQ86YR6 584 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 FAM114A1Q8IWE2 563 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 CCSER1Q9C0I3 900 aa25.6■■□□□ 1.69
FOXA2-201ENST00000377115 CCDC194A0A1B0GVG4 234 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 MS4A14Q96JA4 679 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 ALS2CR12Q96Q35 445 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 ERVV-1B6SEH8 477 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 CEP89Q96ST8 783 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 TRIM9Q9C026 710 aa25.59■■□□□ 1.69
FOXA2-201ENST00000377115 LOC102724159A0A0B4J2E5 919 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 HNRNPH3P31942 346 aaKnown RBP25.58■■□□□ 1.69
FOXA2-201ENST00000377115 ASIC1P78348 528 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 NNTQ13423 1086 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 PWP2Q15269 919 aaKnown RBP25.58■■□□□ 1.69
FOXA2-201ENST00000377115 FLT1P17948 1338 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 AKR1B10O60218 316 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 ZEB2O60315 1214 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 MNAT1P51948 309 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 CAPN7Q9Y6W3 813 aa25.58■■□□□ 1.69
FOXA2-201ENST00000377115 ZSCAN5CA6NGD5 496 aaPredicted RBP25.57■■□□□ 1.68
FOXA2-201ENST00000377115 M0R2N6 131 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 FAM153BP0C7A2 387 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 PCP11498 1178 aaKnown RBP25.57■■□□□ 1.68
FOXA2-201ENST00000377115 FAM153CQ494X1 144 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 MYCBPQ99417 103 aaPredicted RBP25.57■■□□□ 1.68
FOXA2-201ENST00000377115 TLR10Q9BXR5 811 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 FAM153AQ9UHL3 310 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 PCDHA6Q9UN73 950 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 SIK3Q9Y2K2 1263 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 PCDHA8Q9Y5H6 950 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 ESYT3A0FGR9 886 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 CYP2D6P10635 497 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 PAFAH1B1P43034 410 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 STAG2Q8N3U4 1231 aa25.57■■□□□ 1.68
FOXA2-201ENST00000377115 CCDC43Q96MW1 224 aaKnown RBP25.57■■□□□ 1.68
FOXA2-201ENST00000377115 BUB1O43683 1085 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 GLI1P08151 1106 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 TNFRSF8P28908 595 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 CARSP49589 748 aaKnown RBP25.56■■□□□ 1.68
FOXA2-201ENST00000377115 CNPY4Q8N129 248 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 MTMR8Q96EF0 704 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 RNPC3Q96LT9 517 aaKnown RBP25.56■■□□□ 1.68
FOXA2-201ENST00000377115 SEMA6BQ9H3T3 888 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 LRRC53A6NM62 1247 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 LCA5LO95447 670 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 SLC4A8Q2Y0W8 1093 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 CCDC152Q4G0S7 254 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 RCSD1Q6JBY9 416 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 CABP7Q86V35 215 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 GPATCH11Q8N954 259 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 KIAA0895Q8NCT3 520 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 MMRN2Q9H8L6 949 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 NFU1Q9UMS0 254 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 COL4A1P02462 1669 aa25.56■■□□□ 1.68
FOXA2-201ENST00000377115 ZNF804BA4D1E1 1349 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 ZNF233A6NK53 670 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 MYO1FO00160 1098 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 ORC4O43929 436 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 MAGEA1P43355 309 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 ATP2B2Q01814 1243 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 APBA1Q02410 837 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 TXNRD1Q16881 649 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 RRAGAQ7L523 313 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 A0A1B0GUL6 1792 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 ERCC3P19447 782 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 GUCY1A3Q02108 690 aa25.55■■□□□ 1.68
FOXA2-201ENST00000377115 GFPT1Q06210 699 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms