RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PDE4DQ08499 809 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
HDAC6-204ENST00000376643 TTBK2Q6IQ55 1244 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 TAPT1Q6NXT6 567 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 RGS22Q8NE09 1264 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-204ENST00000376643 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 KAT14Q9H8E8 782 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
HDAC6-204ENST00000376643 NFIBO00712 420 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 DNAJB2P25686 324 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 EPHB4P54760 987 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 ASPRV1Q53RT3 343 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 RPUSD2Q8IZ73 545 aaKnown RBP17.28■□□□□ 0.36
HDAC6-204ENST00000376643 SCFD2Q8WU76 684 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.28■□□□□ 0.365e-7■■■□□ 15.3
HDAC6-204ENST00000376643 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 KRT23Q9C075 422 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 IL23AQ9NPF7 189 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 COL6A3P12111 3177 aa17.28■□□□□ 0.36
HDAC6-204ENST00000376643 ASTN1O14525 1302 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 RBM47A0AV96 593 aaKnown RBP17.27■□□□□ 0.36
HDAC6-204ENST00000376643 PFKMP08237 780 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 CSF2RAP15509 400 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 CALML3P27482 149 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 RAB30Q15771 203 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.36
HDAC6-204ENST00000376643 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 MCF2L2Q86YR7 1114 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 TBC1D10CQ8IV04 446 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 TIFAQ96CG3 184 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 PPP1R12CQ9BZL4 782 aa17.27■□□□□ 0.36
HDAC6-204ENST00000376643 ABCB11O95342 1321 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
HDAC6-204ENST00000376643 TMEM240Q5SV17 173 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-204ENST00000376643 PDGFCQ9NRA1 345 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 MSRAQ9UJ68 235 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
HDAC6-204ENST00000376643 FGBP02675 491 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-204ENST00000376643 TRAF1Q13077 416 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 TTLL4Q14679 1199 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 HERVK_113Q902F9 699 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 ANKS1AQ92625 1134 aa17.25■□□□□ 0.35
HDAC6-204ENST00000376643 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-204ENST00000376643 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-204ENST00000376643 NEDD4P46934 1319 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 KDM4AO75164 1064 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 PARP1P09874 1014 aaKnown RBP17.24■□□□□ 0.35
HDAC6-204ENST00000376643 EDNRBP24530 442 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 CYP2C18P33260 490 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 PTPN11Q06124 597 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-204ENST00000376643 ZNF365Q70YC5 407 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 GAS2L1Q99501 681 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-204ENST00000376643 ALDH8A1Q9H2A2 487 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-204ENST00000376643 ZNF576Q9H609 170 aa17.24■□□□□ 0.35
HDAC6-204ENST00000376643 MRPL11Q9Y3B7 192 aaKnown RBP17.24■□□□□ 0.35
HDAC6-204ENST00000376643 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 B4GALT4O60513 344 aa17.23■□□□□ 0.35
HDAC6-204ENST00000376643 PURAQ00577 322 aaKnown RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 TRDNQ13061 729 aa17.23■□□□□ 0.35
HDAC6-204ENST00000376643 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 NFRKBQ6P4R8 1299 aa17.23■□□□□ 0.35
HDAC6-204ENST00000376643 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 IWS1Q96ST2 819 aa17.23■□□□□ 0.35
HDAC6-204ENST00000376643 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
HDAC6-204ENST00000376643 MYL3P08590 195 aa17.22■□□□□ 0.35
HDAC6-204ENST00000376643 RFC2P35250 354 aa17.22■□□□□ 0.35
HDAC6-204ENST00000376643 USH1GQ495M9 461 aa17.22■□□□□ 0.35
HDAC6-204ENST00000376643 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
HDAC6-204ENST00000376643 SYMPKQ92797 1274 aaKnown RBP17.22■□□□□ 0.35
HDAC6-204ENST00000376643 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
HDAC6-204ENST00000376643 TNKSO95271 1327 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 A6NJR5 290 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 B4E1Z4 1266 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 ACRP10323 421 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 TXNP10599 105 aaKnown RBP17.21■□□□□ 0.35
HDAC6-204ENST00000376643 ACTN1P12814 892 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 PSMC6P62333 389 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
HDAC6-204ENST00000376643 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 CCDC155Q8N6L0 562 aa17.21■□□□□ 0.35
HDAC6-204ENST00000376643 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms