RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 MORC4Q8TE76 937 aa18.19■□□□□ 0.5
SDHB-201ENST00000375499 MTMR8Q96EF0 704 aa18.19■□□□□ 0.5
SDHB-201ENST00000375499 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
SDHB-201ENST00000375499 LY9Q9HBG7 655 aa18.19■□□□□ 0.5
SDHB-201ENST00000375499 PHF24Q9UPV7 400 aa18.19■□□□□ 0.5
SDHB-201ENST00000375499 UNC80Q8N2C7 3258 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 ASB14A6NK59 587 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 CYTH3O43739 400 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 DUSP11O75319 330 aaKnown RBP18.18■□□□□ 0.5
SDHB-201ENST00000375499 CDC45O75419 566 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
SDHB-201ENST00000375499 SNX17Q15036 470 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 CCSAPQ6IQ19 270 aaPredicted RBP18.18■□□□□ 0.5
SDHB-201ENST00000375499 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 CDX2Q99626 313 aaPredicted RBP18.18■□□□□ 0.5
SDHB-201ENST00000375499 MYL10Q9BUA6 226 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
SDHB-201ENST00000375499 A0A1W2PQ45 241 aaPredicted RBP18.17■□□□□ 0.5
SDHB-201ENST00000375499 A0A1W2PQY0 241 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 OPLAHO14841 1288 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 PRC1O43663 620 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 DHX16O60231 1041 aaKnown RBP18.17■□□□□ 0.5
SDHB-201ENST00000375499 TRIM60Q495X7 471 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 C1orf53Q5VUE5 145 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 RNF180Q86T96 592 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 UPF3AQ9H1J1 476 aaKnown RBP18.17■□□□□ 0.5
SDHB-201ENST00000375499 GNEQ9Y223 722 aaKnown RBP18.17■□□□□ 0.5
SDHB-201ENST00000375499 ATP11BQ9Y2G3 1177 aa18.17■□□□□ 0.5
SDHB-201ENST00000375499 TMEM265A0A087WTH1 108 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 ERICH2A1L162 156 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
SDHB-201ENST00000375499 SMPD1P17405 629 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 ABCB11O95342 1321 aa18.16■□□□□ 0.5
SDHB-201ENST00000375499 C6orf222P0C671 652 aaPredicted RBP18.15■□□□□ 0.5
SDHB-201ENST00000375499 EDNRBP24530 442 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 CST5P28325 142 aaPredicted RBP18.15■□□□□ 0.5
SDHB-201ENST00000375499 GJA9P57773 515 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 BEX3Q00994 111 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 TNFAIP2Q03169 654 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 SART3Q15020 963 aaKnown RBP18.15■□□□□ 0.5
SDHB-201ENST00000375499 SHHQ15465 462 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 KCNA10Q16322 511 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 FBXO11Q86XK2 927 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 ZNF654Q8IZM8 581 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
SDHB-201ENST00000375499 FAM161BQ96MY7 647 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 RIOX1Q9H6W3 641 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 PRDM6Q9NQX0 595 aa18.15■□□□□ 0.5
SDHB-201ENST00000375499 NEFLP07196 543 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 RXRAP19793 462 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 ACLYP53396 1101 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 ADCK5Q3MIX3 580 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 TLK2Q86UE8 772 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 SYTL5Q8TDW5 730 aaPredicted RBP18.14■□□□□ 0.49
SDHB-201ENST00000375499 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 PIGSQ96S52 555 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 VTA1Q9NP79 307 aa18.14■□□□□ 0.49
SDHB-201ENST00000375499 ADD3Q9UEY8 706 aaKnown RBP18.14■□□□□ 0.49
SDHB-201ENST00000375499 ZBTB5O15062 677 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 MCM5P33992 734 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 NKX3-2P78367 333 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 SH3RF1Q7Z6J0 888 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 CATIPQ7Z7H3 387 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 RGS22Q8NE09 1264 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 TAAR1Q96RJ0 339 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 TSEN34Q9BSV6 310 aaKnown RBP18.13■□□□□ 0.49
SDHB-201ENST00000375499 PDLIM7Q9NR12 457 aa18.13■□□□□ 0.49
SDHB-201ENST00000375499 KIAA1217Q5T5P2 1943 aa18.12■□□□□ 0.49
SDHB-201ENST00000375499 ASGR1P07306 291 aa18.12■□□□□ 0.49
SDHB-201ENST00000375499 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
SDHB-201ENST00000375499 DNERQ8NFT8 737 aa18.12■□□□□ 0.49
SDHB-201ENST00000375499 AMNQ9BXJ7 453 aa18.12■□□□□ 0.49
SDHB-201ENST00000375499 MRPL11Q9Y3B7 192 aaKnown RBP18.12■□□□□ 0.49
SDHB-201ENST00000375499 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 TRIM43BA6NCK2 446 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 DDAH1O94760 285 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 PLEKHA8P1O95397 391 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 TLE2Q04725 743 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
SDHB-201ENST00000375499 GNASQ5JWF2 1037 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 TRIM43Q96BQ3 446 aaPredicted RBP18.11■□□□□ 0.49
SDHB-201ENST00000375499 TMEM87BQ96K49 555 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SDHB-201ENST00000375499 RBM47A0AV96 593 aaKnown RBP18.1■□□□□ 0.49
SDHB-201ENST00000375499 DYNC1LI2O43237 492 aaPredicted RBP18.1■□□□□ 0.49
SDHB-201ENST00000375499 PQBP1O60828 265 aaKnown RBP18.1■□□□□ 0.49
SDHB-201ENST00000375499 ARIH2O95376 493 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms