RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NPLOC4Q8TAT6 608 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 SNX21Q969T3 373 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 APBA2Q99767 749 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 LCTP09848 1927 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 PTPDC1A2A3K4 754 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 STXBP3O00186 592 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 ADCY3O60266 1144 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 IGHA2P01877 340 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 HSD17B4P51659 736 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 CCDC83Q8IWF9 413 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-202ENST00000374676 MCM3APO60318 1980 aa13.09□□□□□ -0.31
HSPG2-202ENST00000374676 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-202ENST00000374676 PIK3CDO00329 1044 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 CFBP00751 764 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
HSPG2-202ENST00000374676 MRPL12P52815 198 aaKnown RBP13.08□□□□□ -0.32
HSPG2-202ENST00000374676 NAPAP54920 295 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 OLFML2BQ68BL8 750 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 MAMDC4Q6UXC1 1216 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-202ENST00000374676 WASF1Q92558 559 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 MAML3Q96JK9 1138 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 FGD4Q96M96 766 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 PSTPIP2Q9H939 334 aa13.08□□□□□ -0.32
HSPG2-202ENST00000374676 ADD3Q9UEY8 706 aaKnown RBP13.08□□□□□ -0.32
HSPG2-202ENST00000374676 KIAA0100Q14667 2235 aaKnown RBP13.07□□□□□ -0.32
HSPG2-202ENST00000374676 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 MEIS2O14770 477 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 CALML3P27482 149 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 GRK4P32298 578 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
HSPG2-202ENST00000374676 CUL4AQ13619 759 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 CUL5Q93034 780 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 TINF2Q9BSI4 451 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 ZMYND12Q9H0C1 365 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
HSPG2-202ENST00000374676 ASB14A6NK59 587 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 B4DLN1 442 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 JAK2O60674 1132 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 HMGCRP04035 888 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 ELNP15502 786 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 GNA11P29992 359 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 ADCY7P51828 1080 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 CCL14Q16627 93 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-202ENST00000374676 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 TRIB2Q92519 343 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 FLRT1Q9NZU1 646 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
HSPG2-202ENST00000374676 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 XBP1P17861 261 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 MFSD14CQ5VZR4 134 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 NSUN6Q8TEA1 469 aaKnown RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 ALG1Q9BT22 464 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 VPS54Q9P1Q0 977 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-202ENST00000374676 ASTN1O14525 1302 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 HTTP42858 3142 aa13.05□□□□□ -0.32
HSPG2-202ENST00000374676 DTNBO60941 627 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 EDNRBP24530 442 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 CLK2P49760 499 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms