RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BAATQ14032 418 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-201ENST00000374673 SLC30A10Q6XR72 485 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 FAM133AQ8N9E0 248 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 NPLOC4Q8TAT6 608 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 PXYLP1Q8TE99 480 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 SNX21Q969T3 373 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 LLPHQ9BRT6 129 aaKnown RBP17.31■□□□□ 0.36
HSPG2-201ENST00000374673 POTEB2H3BUK9 544 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 HSD17B4P51659 736 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 NAPAP54920 295 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 TYW1BQ6NUM6 668 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 TRMT44Q8IYL2 757 aaKnown RBP17.3■□□□□ 0.36
HSPG2-201ENST00000374673 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 TBC1D5Q92609 795 aa17.3■□□□□ 0.36
HSPG2-201ENST00000374673 ADCY3O60266 1144 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 CFBP00751 764 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
HSPG2-201ENST00000374673 OLFML2BQ68BL8 750 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 ZNF467Q7Z7K2 595 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-201ENST00000374673 TEX2Q8IWB9 1127 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-201ENST00000374673 SLAIN1Q8ND83 568 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-201ENST00000374673 MAML3Q96JK9 1138 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 FGD4Q96M96 766 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-201ENST00000374673 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
HSPG2-201ENST00000374673 ESYT2A0FGR8 921 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-201ENST00000374673 PIK3CDO00329 1044 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 JAK2O60674 1132 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 IGHA2P01877 340 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 CALML3P27482 149 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 GRK4P32298 578 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 CCL14Q16627 93 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 MSL3Q8N5Y2 521 aaKnown RBP17.28■□□□□ 0.36
HSPG2-201ENST00000374673 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-201ENST00000374673 TRIB2Q92519 343 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 WASF1Q92558 559 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 MCOLN1Q9GZU1 580 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 MCM3APO60318 1980 aa17.28■□□□□ 0.36
HSPG2-201ENST00000374673 ASTN1O14525 1302 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 LOC102724159A0A0B4J2E5 919 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 SOWAHBA6NEL2 793 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-201ENST00000374673 MEIS2O14770 477 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 HMGN5P82970 282 aaKnown RBP17.27■□□□□ 0.36
HSPG2-201ENST00000374673 PWP2Q15269 919 aaKnown RBP17.27■□□□□ 0.36
HSPG2-201ENST00000374673 MAMDC4Q6UXC1 1216 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 DNERQ8NFT8 737 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 CUL5Q93034 780 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 SHISA4Q96DD7 197 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 FLRT1Q9NZU1 646 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 COL20A1Q9P218 1284 aa17.27■□□□□ 0.36
HSPG2-201ENST00000374673 ADD3Q9UEY8 706 aaKnown RBP17.27■□□□□ 0.36
HSPG2-201ENST00000374673 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 DTNBO60941 627 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 HMGCRP04035 888 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 ELNP15502 786 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 ALDH5A1P51649 535 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-201ENST00000374673 ADCY7P51828 1080 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 CUL4AQ13619 759 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 COL13A1Q5TAT6 717 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-201ENST00000374673 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
HSPG2-201ENST00000374673 TINF2Q9BSI4 451 aa17.26■□□□□ 0.35
HSPG2-201ENST00000374673 SYNGAP1Q96PV0 1343 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 ASB14A6NK59 587 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 XBP1P17861 261 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 GNA11P29992 359 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 HOXA13P31271 388 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-201ENST00000374673 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
HSPG2-201ENST00000374673 SLC9C1Q4G0N8 1177 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
HSPG2-201ENST00000374673 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
HSPG2-201ENST00000374673 MFSD14CQ5VZR4 134 aa17.24■□□□□ 0.35
HSPG2-201ENST00000374673 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
HSPG2-201ENST00000374673 SH3TC2Q8TF17 1288 aa17.24■□□□□ 0.35
HSPG2-201ENST00000374673 ARMC5Q96C12 935 aa17.24■□□□□ 0.35
HSPG2-201ENST00000374673 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
HSPG2-201ENST00000374673 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 INHAP05111 366 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 EDNRBP24530 442 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 NLRP5P59047 1200 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 UBXN2AP68543 259 aa17.23■□□□□ 0.35
HSPG2-201ENST00000374673 AP3B2Q13367 1082 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms