RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 ERCC3P19447 782 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 U2AF2P26368 475 aaKnown RBP eCLIP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 COPB2P35606 906 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 HSD17B4P51659 736 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 NUCB2P80303 420 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 FOXD4L5Q5VV16 416 aaPredicted RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 SLC30A10Q6XR72 485 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 FOXD4L4Q8WXT5 416 aaPredicted RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 CFHR5Q9BXR6 569 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 FOXP1Q9H334 677 aaPredicted RBP16.09■□□□□ 0.17
TCEA3-201ENST00000374601 RNF186Q9NXI6 227 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
TCEA3-201ENST00000374601 KIAA1217Q5T5P2 1943 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 CCNA1P78396 465 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
TCEA3-201ENST00000374601 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 BRMS1Q9HCU9 246 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 A1CFQ9NQ94 594 aaKnown RBP16.08■□□□□ 0.16
TCEA3-201ENST00000374601 COL20A1Q9P218 1284 aa16.08■□□□□ 0.16
TCEA3-201ENST00000374601 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.16
TCEA3-201ENST00000374601 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
TCEA3-201ENST00000374601 CFBP00751 764 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 NOSTRINQ8IVI9 506 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 MROH8Q9H579 483 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
TCEA3-201ENST00000374601 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
TCEA3-201ENST00000374601 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
TCEA3-201ENST00000374601 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
TCEA3-201ENST00000374601 BAATQ14032 418 aaPredicted RBP16.06■□□□□ 0.16
TCEA3-201ENST00000374601 SAMD3Q8N6K7 520 aa16.06■□□□□ 0.16
TCEA3-201ENST00000374601 DNAJC5GQ8N7S2 189 aa16.06■□□□□ 0.16
TCEA3-201ENST00000374601 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
TCEA3-201ENST00000374601 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
TCEA3-201ENST00000374601 PFASO15067 1338 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 TRPA1O75762 1119 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
TCEA3-201ENST00000374601 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 PIK3AP1Q6ZUJ8 805 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
TCEA3-201ENST00000374601 ANO3Q9BYT9 981 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 MAF1Q9H063 256 aa16.05■□□□□ 0.16
TCEA3-201ENST00000374601 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
TCEA3-201ENST00000374601 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 MAPK4P31152 587 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 WDR78Q5VTH9 848 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 MMP19Q99542 508 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
TCEA3-201ENST00000374601 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
TCEA3-201ENST00000374601 ASTN1O14525 1302 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 DNAJC25-GNG10A0A024R161 153 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 CCDC194A0A1B0GVG4 234 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 WNT7AO00755 349 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 EDIL3O43854 480 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 FOSP01100 380 aaPredicted RBP16.03■□□□□ 0.16
TCEA3-201ENST00000374601 CTGFP29279 349 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 TOB1P50616 345 aaPredicted RBP16.03■□□□□ 0.16
TCEA3-201ENST00000374601 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.16
TCEA3-201ENST00000374601 INF2Q27J81 1249 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 CRYGNQ8WXF5 182 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 FGD4Q96M96 766 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
TCEA3-201ENST00000374601 DOCK5Q9H7D0 1870 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 SPDYE3A6NKU9 549 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 FCER1AP12319 257 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 PTPREP23469 700 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 SREBF1P36956 1147 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 CAP1Q01518 475 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 CNTN2Q02246 1040 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 GRB14Q14449 540 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 KCTD2Q14681 263 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 MYSM1Q5VVJ2 828 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
TCEA3-201ENST00000374601 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms