RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 PDILTQ8N807 584 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 PNMA5Q96PV4 448 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 PSTPIP2Q9H939 334 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 TBX3O15119 743 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SREBF1P36956 1147 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 GRB10Q13322 594 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 GIMAP8Q8ND71 665 aaPredicted RBP14.2□□□□□ -0.14
PRPF4-202ENST00000374199 ETNPPLQ8TBG4 499 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 RMND1Q9NWS8 449 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 STK17AQ9UEE5 414 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 RPN1P04843 607 aaKnown RBP14.2□□□□□ -0.14
PRPF4-202ENST00000374199 POLD1P28340 1107 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 TPM4P67936 248 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 NR1I3Q14994 352 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 KARSQ15046 597 aaKnown RBP14.2□□□□□ -0.14
PRPF4-202ENST00000374199 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SSC5DA1L4H1 1573 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 PP2D1A8MPX8 630 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 TXLNAP40222 546 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 NOLC1Q14978 699 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 LETM2Q2VYF4 491 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ZNF830Q96NB3 372 aaPredicted RBP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 AMNQ9BXJ7 453 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 VAT1LQ9HCJ6 419 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 IFNKQ9P0W0 207 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 PTPRFP10586 1907 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ZBTB7AO95365 584 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 TDP2O95551 362 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 FECHP22830 423 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ZRSR1Q15695 479 aaKnown RBP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 JAKMIP3Q5VZ66 844 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ARMCX5Q6P1M9 558 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ADSSL1Q8N142 457 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 TMEM39BQ9GZU3 492 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 PTMAP06454 111 aaKnown RBP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 NAP1L5Q96NT1 182 aaPredicted RBP14.19□□□□□ -0.14
PRPF4-202ENST00000374199 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
PRPF4-202ENST00000374199 CBFA2T2O43439 604 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 PLCG1P19174 1290 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 CALCRLQ16602 461 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 NBPF9Q3BBW0 867 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 CABP7Q86V35 215 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 TMEM139Q8IV31 216 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 SPC24Q8NBT2 197 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 TRIM9Q9C026 710 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 LIMA1Q9UHB6 759 aaKnown RBP14.18□□□□□ -0.14
PRPF4-202ENST00000374199 PCDHA1Q9Y5I3 950 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 CASP1P29466 404 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 STAT6P42226 847 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 ECE1P42892 770 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
PRPF4-202ENST00000374199 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 NFE2L3Q9Y4A8 694 aa14.18□□□□□ -0.14
PRPF4-202ENST00000374199 COL11A1P12107 1806 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-202ENST00000374199 LCTP09848 1927 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 CLRN2A0PK11 232 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-202ENST00000374199 UBE2SQ16763 222 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 RRAGBQ5VZM2 374 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 KCTD17Q8N5Z5 321 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 CCDC150Q8NCX0 1101 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 ACER1Q8TDN7 264 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 SYNRGQ9UMZ2 1314 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 SHTN1A0MZ66 631 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 MTMR7Q9Y216 660 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
PRPF4-202ENST00000374199 AFMP43652 599 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 LRMPQ12912 555 aa14.17□□□□□ -0.14
PRPF4-202ENST00000374199 ADD3Q9UEY8 706 aaKnown RBP14.17□□□□□ -0.14
PRPF4-202ENST00000374199 RPTORQ8N122 1335 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 EGFRP00533 1210 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 STAT2P52630 851 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 TRAF1Q13077 416 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 FAM160B2Q86V87 743 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 FBXO11Q86XK2 927 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 DDX25Q9UHL0 483 aaKnown RBP14.16□□□□□ -0.14
PRPF4-202ENST00000374199 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 CDC25AP30304 524 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 FEM1BQ9UK73 627 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 ZNF536O15090 1300 aa14.16□□□□□ -0.14
PRPF4-202ENST00000374199 PVALEFA0A1B0GWK0 134 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 FRMD3A2A2Y4 597 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 UBA7P41226 1012 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 ARID5BQ14865 1188 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 KMT5BQ4FZB7 885 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms