RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 GCOM1H8Y6P7 765 aaPredicted RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 POLR2MP0CAP2 368 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 MAP2K2P36507 400 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 HSD17B4P51659 736 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 HTRA3P83110 453 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 UBE2SQ16763 222 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 Q3C1V9 767 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 KRT25Q7Z3Z0 450 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 ACAD9Q9H845 621 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 BIN2Q9UBW5 565 aaPredicted RBP16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 FBXO40Q9UH90 709 aa16.75■□□□□ 0.27
SMPDL3B-201ENST00000373888 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 CFBP00751 764 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 VEGFBP49765 207 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 AP3B2Q13367 1082 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 JAKMIP3Q5VZ66 844 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 SHCBP1Q8NEM2 672 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 TBC1D5Q92609 795 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 TMEM260Q9NX78 707 aa16.74■□□□□ 0.27
SMPDL3B-201ENST00000373888 TRAK2O60296 914 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 TLR2O60603 784 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 FOSP01100 380 aaPredicted RBP16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 BCRP11274 1271 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 ERCC3P19447 782 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 CCNA1P78396 465 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 PIK3AP1Q6ZUJ8 805 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 MROH8Q9H579 483 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
SMPDL3B-201ENST00000373888 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 CA12O43570 354 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 HSPA6P17066 643 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 HOXA13P31271 388 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 RILPL1Q5EBL4 403 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 RNF207Q6ZRF8 634 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 NCAPG2Q86XI2 1143 aa16.72■□□□□ 0.27
SMPDL3B-201ENST00000373888 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 TRAPPC10P48553 1259 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 RPS6P62753 249 aaKnown RBP16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 CRHR2Q13324 411 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 ATL3Q6DD88 541 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 C17orf99Q6UX52 265 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 NSMFQ6X4W1 530 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
SMPDL3B-201ENST00000373888 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 SLC30A10Q6XR72 485 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 SYTL5Q8TDW5 730 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 PORCNQ9H237 461 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 A1CFQ9NQ94 594 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 PFASO15067 1338 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 BAATQ14032 418 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 INF2Q27J81 1249 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 CFHR5Q9BXR6 569 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 COL20A1Q9P218 1284 aa16.7■□□□□ 0.26
SMPDL3B-201ENST00000373888 SREBF1P36956 1147 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 KRT85P78386 507 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 FCHSD1Q86WN1 690 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 CRYGNQ8WXF5 182 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 CHAMP1Q96JM3 812 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 FRMPD4Q14CM0 1322 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 RPTORQ8N122 1335 aa16.69■□□□□ 0.26
SMPDL3B-201ENST00000373888 MAPK4P31152 587 aa16.68■□□□□ 0.26
SMPDL3B-201ENST00000373888 USP28Q96RU2 1077 aa16.68■□□□□ 0.26
SMPDL3B-201ENST00000373888 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
SMPDL3B-201ENST00000373888 POLR3EQ9NVU0 708 aa16.68■□□□□ 0.26
SMPDL3B-201ENST00000373888 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
SMPDL3B-201ENST00000373888 TCHHQ07283 1943 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 EDIL3O43854 480 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 ABRAQ8N0Z2 381 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 MMP19Q99542 508 aa16.67■□□□□ 0.26
SMPDL3B-201ENST00000373888 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms