RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 A0A0G2JLW4 131 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 TMEM132AQ24JP5 1023 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 STRIP1Q5VSL9 837 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 FBXO11Q86XK2 927 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 FAM76AQ8TAV0 307 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 SNX29Q8TEQ0 813 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 CSRNP2Q9H175 543 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 DAGLAQ9Y4D2 1042 aa11.13□□□□□ -0.63
KDM4A-201ENST00000372396 B4DLN1 442 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 CPP00450 1065 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 FOSP01100 380 aaPredicted RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 RPSAP08865 295 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 KLRK1P26718 216 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 MIPOL1Q8TD10 442 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 AK8Q96MA6 479 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PLSCR1O15162 318 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 ABCD1P33897 745 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PDE4DQ08499 809 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PAK1Q13153 545 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 HSP90AA4PQ58FG1 418 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PPP4R3AQ6IN85 833 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 HHIPL2Q6UWX4 724 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 AMNQ9BXJ7 453 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 CUEDC2Q9H467 287 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 CTNND2Q9UQB3 1225 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 ARL6IP4Q66PJ3 421 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 FCHSD1Q86WN1 690 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 ZBTB10Q96DT7 871 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 THOC1Q96FV9 657 aaKnown RBP11.12□□□□□ -0.63
KDM4A-201ENST00000372396 PIGSQ96S52 555 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
KDM4A-201ENST00000372396 CTDNEP1O95476 244 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 SNCBQ16143 134 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
KDM4A-201ENST00000372396 NFE2L3Q9Y4A8 694 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 FLT1P17948 1338 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 ZBED4O75132 1171 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 RAD17O75943 681 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 SLC15A2Q16348 729 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 SLC44A5Q8NCS7 719 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 AK9Q5TCS8 1911 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 ENO4A6NNW6 628 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 PTPREP23469 700 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 SLC8A1P32418 973 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
KDM4A-201ENST00000372396 USH1GQ495M9 461 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 LRRC23Q53EV4 343 aaPredicted RBP11.11□□□□□ -0.63
KDM4A-201ENST00000372396 DCAF4Q8WV16 495 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 G3BP2Q9UN86 482 aaKnown RBP11.11□□□□□ -0.63
KDM4A-201ENST00000372396 PCDHB6Q9Y5E3 794 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 CLRN2A0PK11 232 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 NDUFAB1O14561 156 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 NMT2O60551 498 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 TRIM21P19474 475 aaKnown RBP11.11□□□□□ -0.63
KDM4A-201ENST00000372396 PRPHP41219 470 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 AOC3Q16853 763 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 RESP18Q5W5W9 173 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 FOXR1Q6PIV2 292 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
KDM4A-201ENST00000372396 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 HOXA10P31260 410 aaPredicted RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 CETN1Q12798 172 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 BCAS4Q8TDM0 211 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 USO1O60763 962 aaKnown RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 FAM13AO94988 1023 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
KDM4A-201ENST00000372396 TRIM14Q14142 442 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 CCDC26Q8TAB7 109 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 CEP95Q96GE4 821 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 TAOK3Q9H2K8 898 aa11.1□□□□□ -0.63
KDM4A-201ENST00000372396 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms