RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 DAB1O75553 588 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 ATP1A3P13637 1013 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 CA4P22748 312 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 PPM1FP49593 454 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 GNAQP50148 359 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 TMED2Q15363 201 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SPATA1Q5VX52 437 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SYT2Q8N9I0 419 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 B4GALNT2Q8NHY0 566 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 NEK9Q8TD19 979 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 ANKRD7Q92527 254 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 IQCDQ96DY2 449 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 C6orf50Q9HD87 102 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SOS1Q07889 1333 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 A0A0G2JND7 137 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 WBP4O75554 376 aaKnown RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 CEP19Q96LK0 163 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 PLEKHF1Q96S99 279 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 FTCDO95954 541 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 KRT3P12035 628 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 KCNA3P22001 575 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 STRN3Q13033 797 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 BIRC3Q13489 604 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 DCUN1D2Q6PH85 259 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 DCLK2Q8N568 766 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 DTX3LQ8TDB6 740 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SEPT10Q9P0V9 454 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SCHIP1Q9P0W5 487 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 ZNF518AQ6AHZ1 1483 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 B4E1Z4 1266 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 ADCY3O60266 1144 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 TOM1O60784 492 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 SRGAP2O75044 1071 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 GPTP24298 496 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 NME9Q86XW9 330 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 RIN2Q8WYP3 895 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 SH3GL2Q99962 352 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 MYL10Q9BUA6 226 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 ASCC2Q9H1I8 757 aaPredicted RBP9.33□□□□□ -0.92
LCA5-201ENST00000369846 SMYD3Q9H7B4 428 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 BAG5Q9UL15 447 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 MKL2Q9ULH7 1088 aa9.33□□□□□ -0.92
LCA5-201ENST00000369846 PIK3R4Q99570 1358 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 SPDYE3A6NKU9 549 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 KRT8P05787 483 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 GNAT1P11488 350 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 STAT1P42224 750 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 EPHB1P54762 984 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 DMPKQ09013 629 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 CYLC2Q14093 348 aaPredicted RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 CCDC144BQ3MJ40 725 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 C1orf146Q5VVC0 180 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 CLIC6Q96NY7 704 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
LCA5-201ENST00000369846 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 CNGB3Q9NQW8 809 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 TMA7Q9Y2S6 64 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 PPME1Q9Y570 386 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 ATF2P15336 505 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 TTC38Q5R3I4 469 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 SESTD1Q86VW0 696 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 HAUS8Q9BT25 410 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 TUBB6Q9BUF5 446 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 NDEL1Q9GZM8 345 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 ECT2Q9H8V3 914 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 PAPOLBQ9NRJ5 636 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 TYW1Q9NV66 732 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 DBNLQ9UJU6 430 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.32□□□□□ -0.92
LCA5-201ENST00000369846 PREX2Q70Z35 1606 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 CYP7A1P22680 504 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 CMA1P23946 247 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 RAP1GDS1P52306 607 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 WDR78Q5VTH9 848 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 ZNF710Q8N1W2 664 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 ENOX1Q8TC92 643 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 MAML1Q92585 1016 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 FMO2Q99518 471 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 TRMT112Q9UI30 125 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 NBPF26B4DH59 902 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 PPP1R37O75864 691 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 TXKP42681 527 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 COPB1P53618 953 aaKnown RBP9.32□□□□□ -0.92
LCA5-201ENST00000369846 LIN9Q5TKA1 542 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 LMBR1LQ6UX01 489 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 SH2D3CQ8N5H7 860 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 NBPF15Q8N660 670 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 MAIP1Q8WWC4 291 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
LCA5-201ENST00000369846 NDE1Q9NXR1 346 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms