RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
EFNA1-201ENST00000368406 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
EFNA1-201ENST00000368406 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
EFNA1-201ENST00000368406 DIS3Q9Y2L1 958 aaKnown RBP14.59□□□□□ -0.07
EFNA1-201ENST00000368406 PCDHA1Q9Y5I3 950 aa14.59□□□□□ -0.07
EFNA1-201ENST00000368406 ABCB11O95342 1321 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 JAK2O60674 1132 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 DTNBO60941 627 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 CCL5P13501 91 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 SCG2P13521 617 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 CAPN2P17655 700 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 XBP1P17861 261 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 FOSBP53539 338 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 NAPAP54920 295 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 FUT2Q10981 343 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 ST3GAL1Q11201 340 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 TRIM29Q14134 588 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 MTFR1Q15390 333 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 NPLOC4Q8TAT6 608 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 GPKOWQ92917 476 aaPredicted RBP eCLIP14.58□□□□□ -0.07
EFNA1-201ENST00000368406 MTMR8Q96EF0 704 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 RNF208Q9H0X6 261 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 RNF146Q9NTX7 359 aa14.58□□□□□ -0.07
EFNA1-201ENST00000368406 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 DNAJC25-GNG10A0A024R161 153 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 CTDNEP1O95476 244 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 GJB1P08034 283 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.08
EFNA1-201ENST00000368406 SOX10P56693 466 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 CCL14Q16627 93 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 PFKFB3Q16875 520 aaPredicted RBP14.58□□□□□ -0.08
EFNA1-201ENST00000368406 ZNF792Q3KQV3 632 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 MFSD14CQ5VZR4 134 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 SPRYD3Q8NCJ5 442 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.08
EFNA1-201ENST00000368406 TRERF1Q96PN7 1200 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
EFNA1-201ENST00000368406 PAK6Q9NQU5 681 aaPredicted RBP14.58□□□□□ -0.08
EFNA1-201ENST00000368406 MRPL11Q9Y3B7 192 aaKnown RBP14.58□□□□□ -0.08
EFNA1-201ENST00000368406 hCG_1984214I3L0E3 225 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 ANKRD35Q8N283 1001 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 ZNF713Q8N859 430 aaPredicted RBP14.57□□□□□ -0.08
EFNA1-201ENST00000368406 CCDC148Q8NFR7 591 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 ALG1Q9BT22 464 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 UNC93B1Q9H1C4 597 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
EFNA1-201ENST00000368406 FLRT1Q9NZU1 646 aa14.57□□□□□ -0.08
EFNA1-201ENST00000368406 PFASO15067 1338 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 POTEFA5A3E0 1075 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 PPP1R11O60927 126 aaPredicted RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 GJB2P29033 226 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 GJA8P48165 433 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 CACNB2Q08289 660 aaPredicted RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 TRIM32Q13049 653 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 CUL4AQ13619 759 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 NSMFQ6X4W1 530 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 MSL3Q8N5Y2 521 aaKnown RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 CUL5Q93034 780 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 MAF1Q9H063 256 aa14.56□□□□□ -0.08
EFNA1-201ENST00000368406 RBM19Q9Y4C8 960 aaKnown RBP14.56□□□□□ -0.08
EFNA1-201ENST00000368406 SMCHD1A6NHR9 2005 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 PGK2P07205 417 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
EFNA1-201ENST00000368406 MCF2L2Q86YR7 1114 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 VPS54Q9P1Q0 977 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 NRBP1Q9UHY1 535 aa14.55□□□□□ -0.08
EFNA1-201ENST00000368406 STXBP3O00186 592 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 SGPL1O95470 568 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 ADCY7P51828 1080 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 NLRP5P59047 1200 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 PKN1Q16512 942 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 MAMDC4Q6UXC1 1216 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 SMARCC2Q8TAQ2 1214 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 INTS4Q96HW7 963 aaKnown RBP14.54□□□□□ -0.08
EFNA1-201ENST00000368406 AIFM3Q96NN9 605 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.54□□□□□ -0.082e-6■■□□□ 12.8
EFNA1-201ENST00000368406 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
EFNA1-201ENST00000368406 PLXNA1Q9UIW2 1896 aa14.54□□□□□ -0.08
EFNA1-201ENST00000368406 H3BQV1 296 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 NFIBO00712 420 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 CFBP00751 764 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 EN2P19622 333 aaPredicted RBP14.53□□□□□ -0.08
EFNA1-201ENST00000368406 CYP2C19P33261 490 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 GNL2Q13823 731 aaKnown RBP14.53□□□□□ -0.08
EFNA1-201ENST00000368406 FAM133AQ8N9E0 248 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 RGS22Q8NE09 1264 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
EFNA1-201ENST00000368406 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 C8orf76Q96K31 380 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 DEFB118Q96PH6 123 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 TINF2Q9BSI4 451 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 CRISPLD2Q9H0B8 497 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms