RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ZFHX2Q9C0A1 2572 aaPredicted RBP17.6■□□□□ 0.41
VAMP4-202ENST00000367740 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 USP17L21D6R901 530 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 GJB5O95377 273 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 TRIM27P14373 513 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 IRS1P35568 1242 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 RARSP54136 660 aaKnown RBP17.6■□□□□ 0.41
VAMP4-202ENST00000367740 PTPN5P54829 565 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 FAM47CQ5HY64 1035 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 PIP4P2Q8N4L2 257 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 RETREG2Q8NC44 543 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
VAMP4-202ENST00000367740 MBD4O95243 580 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 MYL3P08590 195 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 ATP8B2P98198 1209 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 GPNMBQ14956 572 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 IER5LQ5T953 404 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 ADHFE1Q8IWW8 467 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 RAD9AQ99638 391 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
VAMP4-202ENST00000367740 NLRC5Q86WI3 1866 aa17.58■□□□□ 0.41
VAMP4-202ENST00000367740 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 HAX1O00165 279 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 BFSP2Q13515 415 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 MTG1Q9BT17 334 aaPredicted RBP17.58■□□□□ 0.4
VAMP4-202ENST00000367740 VTA1Q9NP79 307 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 RNF146Q9NTX7 359 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 MUTYHQ9UIF7 546 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 FEM1BQ9UK73 627 aa17.58■□□□□ 0.4
VAMP4-202ENST00000367740 PLXNA3P51805 1871 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 ANP32CO43423 234 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 TCF15Q12870 199 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 COL19A1Q14993 1142 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 TCTN1Q2MV58 587 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
VAMP4-202ENST00000367740 HERC4Q5GLZ8 1057 aaPredicted RBP17.57■□□□□ 0.4
VAMP4-202ENST00000367740 NFRKBQ6P4R8 1299 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 AACSQ86V21 672 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 FBXO22Q8NEZ5 403 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 MRPL38Q96DV4 380 aaKnown RBP17.57■□□□□ 0.4
VAMP4-202ENST00000367740 C17orf80Q9BSJ5 609 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 FAM50BQ9Y247 325 aa17.57■□□□□ 0.4
VAMP4-202ENST00000367740 MICAL3Q7RTP6 2002 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 GOLIM4O00461 696 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 GFRA3O60609 400 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 RASA1P20936 1047 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 CPT1AP50416 773 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 MORC4Q8TE76 937 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 PABPC5Q96DU9 382 aaKnown RBP17.56■□□□□ 0.4
VAMP4-202ENST00000367740 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
VAMP4-202ENST00000367740 C1orf115Q9H7X2 142 aa17.56■□□□□ 0.4
VAMP4-202ENST00000367740 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
VAMP4-202ENST00000367740 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
VAMP4-202ENST00000367740 CNKSR3Q6P9H4 555 aa17.55■□□□□ 0.4
VAMP4-202ENST00000367740 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
VAMP4-202ENST00000367740 PURBQ96QR8 312 aaKnown RBP17.55■□□□□ 0.4
VAMP4-202ENST00000367740 VPS13AQ96RL7 3174 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 CACNA1HO95180 2353 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 ADD2P35612 726 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 PTPN11Q06124 597 aaPredicted RBP17.54■□□□□ 0.4
VAMP4-202ENST00000367740 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 BMP8AQ7Z5Y6 402 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 CTAGE1Q96RT6 745 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
VAMP4-202ENST00000367740 WDR11Q9BZH6 1224 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 GPHNQ9NQX3 736 aaPredicted RBP17.54■□□□□ 0.4
VAMP4-202ENST00000367740 CYP39A1Q9NYL5 469 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 NOD1Q9Y239 953 aa17.54■□□□□ 0.4
VAMP4-202ENST00000367740 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 COL4A6Q14031 1691 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 CXCL10P02778 98 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 CHGBP05060 677 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 FDX1P10109 184 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 TCEAL5Q5H9L2 206 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 BANK1Q8NDB2 785 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 OR6J1Q8NGC5 347 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 TRERF1Q96PN7 1200 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 CRBNQ96SW2 442 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 PRRX2Q99811 253 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 ALG13Q9NP73 1137 aaKnown RBP17.53■□□□□ 0.4
VAMP4-202ENST00000367740 FAM86C1Q9NVL1 165 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
VAMP4-202ENST00000367740 ABHD14A-ACY1A0A1B0GW23 586 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 NBNO60934 754 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 ALAS1P13196 640 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 SELPP16109 830 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 PTGISQ16647 500 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 PTPROQ16827 1216 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 TKFCQ3LXA3 575 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms