RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 KAZALD1Q96I82 304 aa15.35■□□□□ 0.05
CTR9-201ENST00000361367 NLRC4Q9NPP4 1024 aa15.35■□□□□ 0.05
CTR9-201ENST00000361367 CNOT7Q9UIV1 285 aaKnown RBP15.35■□□□□ 0.05
CTR9-201ENST00000361367 KCNJ18B7U540 433 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 CD19P15391 556 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 LMAN1P49257 510 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 KCNJ12Q14500 433 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SPECC1LQ69YQ0 1117 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SLC7A3Q8WY07 619 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 TSGA10Q9BZW7 698 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
CTR9-201ENST00000361367 CCND2P30279 289 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 TMTC1Q8IUR5 882 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 CAPZA3Q96KX2 299 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
CTR9-201ENST00000361367 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 ZRSR2Q15696 482 aaKnown RBP15.34■□□□□ 0.05
CTR9-201ENST00000361367 TSGA10IPQ3SY00 556 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 TDRD7Q8NHU6 1098 aaKnown RBP15.34■□□□□ 0.05
CTR9-201ENST00000361367 PPP1R9BQ96SB3 815 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 OSBPL5Q9H0X9 879 aaPredicted RBP15.34■□□□□ 0.05
CTR9-201ENST00000361367 BCCIPQ9P287 314 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTR9-201ENST00000361367 ZNF609O15014 1411 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SLFN14P0C7P3 912 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 ARHGEF6Q15052 776 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 RNF207Q6ZRF8 634 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 SGMS1Q86VZ5 419 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 GJA10Q969M2 543 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 NOX5Q96PH1 765 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 HOXC10Q9NYD6 342 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 BCL9O00512 1426 aa15.34■□□□□ 0.05
CTR9-201ENST00000361367 STK36Q9NRP7 1315 aa15.33■□□□□ 0.05
CTR9-201ENST00000361367 STOX1Q6ZVD7 989 aa15.33■□□□□ 0.05
CTR9-201ENST00000361367 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.05
CTR9-201ENST00000361367 FANCLQ9NW38 375 aa15.33■□□□□ 0.05
CTR9-201ENST00000361367 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.05
CTR9-201ENST00000361367 TNS2Q63HR2 1409 aa15.33■□□□□ 0.05
CTR9-201ENST00000361367 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 RASA3Q14644 834 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 GRM4Q14833 912 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 ARMCX5Q6P1M9 558 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 FLT1P17948 1338 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 MYZAPP0CAP1 466 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 ADAM9Q13443 819 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 HHIPL2Q6UWX4 724 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 STK17AQ9UEE5 414 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
CTR9-201ENST00000361367 CDC27P30260 824 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 ARHGAP44Q17R89 818 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 SPATA1Q5VX52 437 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.04
CTR9-201ENST00000361367 SPOPO43791 374 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 MAGEA1P43355 309 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 RRAGAQ7L523 313 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 ARHGAP6O43182 974 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
CTR9-201ENST00000361367 LRMPQ12912 555 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 MEIS1O00470 390 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 ARL6IP4Q66PJ3 421 aaKnown RBP15.32■□□□□ 0.04
CTR9-201ENST00000361367 RSBN1LQ6PCB5 846 aaPredicted RBP15.32■□□□□ 0.04
CTR9-201ENST00000361367 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 RNF169Q8NCN4 708 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
CTR9-201ENST00000361367 USP17L15C9J2P7 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L13C9JLJ4 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L11C9JVI0 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L18D6R9N7 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L22D6RA61 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L17D6RBQ6 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L19D6RCP7 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L20D6RJB6 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L24Q0WX57 530 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 USP17L6PQ6QN14 398 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 GSTA5Q7RTV2 222 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 CCDC127Q96BQ5 260 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 CEP170P1Q96L14 293 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 RAVER2Q9HCJ3 691 aaKnown RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 CLCN1P35523 988 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 LIN9Q5TKA1 542 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 CDC42EP5Q6NZY7 148 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 MIS18BP1Q6P0N0 1132 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 JPH2Q9BR39 696 aaPredicted RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 NUCKS1Q9H1E3 243 aaKnown RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 PPP2R5AQ15172 486 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 SBK1Q52WX2 424 aa15.31■□□□□ 0.04
CTR9-201ENST00000361367 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CTR9-201ENST00000361367 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms